DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf6 and CHIA

DIOPT Version :9

Sequence 1:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_970615.2 Gene:CHIA / 27159 HGNCID:17432 Length:476 Species:Homo sapiens


Alignment Length:441 Identity:110/441 - (24%)
Similarity:197/441 - (44%) Gaps:98/441 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQLDLDLGKGLYRT 95
            |.||:.:.:..:.|||:.:.|.::|.|  |.:|:|.:||.:.:....:..|...       ||:.
Human    24 LTCYFTNWAQYRPGLGRFMPDNIDPCL--CTHLIYAFAGRQNNEITTIEWNDVT-------LYQA 79

  Fly    96 VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFDGL 160
            ...||.|...:|.||::||       .:....|  :..::.:|..|..|:.:|...::.|.||||
Human    80 FNGLKNKNSQLKTLLAIGG-------WNFGTAP--FTAMVSTPENRQTFITSVIKFLRQYEFDGL 135

  Fly   161 DVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFRPD----- 220
            |..|::|.::        ||                  ..:.|..||.|:::::.||..:     
Human   136 DFDWEYPGSR--------GS------------------PPQDKHLFTVLVQEMREAFEQEAKQIN 174

  Fly   221 --NLLLSTTV---LPNVNSSLFYDIPAVVNYLDFVNLGTFDF------FTPQRNPEVADYAAPIY 274
              .|:::..|   :.|:.|.  |:||.:..|||::::.|:|.      :|.:.        :|:|
Human   175 KPRLMVTAAVAAGISNIQSG--YEIPQLSQYLDYIHVMTYDLHGSWEGYTGEN--------SPLY 229

  Fly   275 EL---SERNPEFNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDSGDTGV-PPVKDVKDEAP 335
            :.   :..|...||...:.||..|..||.|:.||..|||..:.|::.| :||: .|....   .|
Human   230 KYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPS-NTGIGAPTSGA---GP 290

  Fly   336 VGGNTQVPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSF 400
            .|...:..||:::.|:|..|   .|...:|.:||    |:.     .|||:       ..:||.:
Human   291 AGPYAKESGIWAYYEICTFL---KNGATQGWDAP----QEV-----PYAYQ-------GNVWVGY 336

  Fly   401 EDPDTAADKAGYVRTENLGGVALFDLSYDDFRG-LCTNEKYPILRAIKYRL 450
            ::..:...||.:::....||..::.:..|||.| .|...|:|::..:|..|
Human   337 DNIKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKAL 387

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 109/439 (25%)
Glyco_18 31..429 CDD:214753 101/417 (24%)
CHIANP_970615.2 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 109/439 (25%)
Glyco_18 26..365 CDD:214753 100/415 (24%)