DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf6 and chil-2

DIOPT Version :10

Sequence 1:NP_477081.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_496133.2 Gene:chil-2 / 182431 WormBaseID:WBGene00007466 Length:383 Species:Caenorhabditis elegans


Alignment Length:372 Identity:78/372 - (20%)
Similarity:148/372 - (39%) Gaps:103/372 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFDGLDV 162
            :.|...||:||::.:.|               |:..:|.....:..|:.::.|.|..:.|||:|:
 Worm    89 KAKMDNPNLKIMVEING---------------KFFSVLAEDEKKNSFIKSISSFVVDHKFDGVDI 138

  Fly   163 AWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFRPDNLLLSTT 227
            .|.:|:::         ..:..|.|.|.      ||.|:|                    ::.:.
 Worm   139 FWSWPEDE---------DTFHLFIKEFR------EKLEKH--------------------MIISI 168

  Fly   228 VLPNVNSSL-FYDIPAVVNYLDFVNLGTFDFFTP-QRNPEVADYAAPIYELSERNPEFNVAAQVK 290
            .:|.:...| .:::..::|::||:|:.:.:::.| ..|.......:|:|. .:|.   ||...:|
 Worm   169 AIPRLAQQLEGFNLKLLMNHIDFLNVLSINYYEPLPGNGANIGPISPLYG-GQRG---NVDGTLK 229

  Fly   291 YWLRNNCPASKINVGVATYGRPWKLTDDSGDTGVPPVKDVKDEAPVGGNTQVPG-IYSWPEVCAL 354
            |........|.:|:||...|..|....|.       :.:..|...|..|...|| ...|      
 Worm   230 YLTCITKRPSILNMGVTFTGIFWNGVKDG-------LNEQDDIWKVAQNENGPGKSIGW------ 281

  Fly   355 LPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDPDTAADKAGYVRTENLG 419
                 ..::|.....:.:..|.:|  .|||:....|     |:::||:..:.::|..|||.:|:|
 Worm   282 -----RKFIKDRRNTIPQWHDSSK--SSYAWDPKSK-----IFLAFENEKSLSEKVIYVRNKNIG 334

  Fly   420 GVALFDLSYDDFRGLCTNEKYPILRAI--------------KYRLTN 452
            |:.::::..||      |:. .:|.|:              |||.:|
 Worm   335 GLVIWNVDQDD------NDN-SLLNALTSMDMCARGSGGTMKYRCSN 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_477081.1 GH18_IDGF 30..450 CDD:119352 76/368 (21%)
chil-2NP_496133.2 Glyco_18 42..344 CDD:214753 69/333 (21%)

Return to query results.
Submit another query.