DRSC/TRiP Functional Genomics Resources

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Protein Alignment Picot and tsgA

DIOPT Version :10

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_417823.1 Gene:tsgA / 947869 ECOCYCID:EG11262 Length:393 Species:Escherichia coli


Alignment Length:472 Identity:102/472 - (21%)
Similarity:179/472 - (37%) Gaps:129/472 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ATRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFA 102
            :.|..:|::.||..|     .|...|.:..||      .|...:|      .::|: .|....|.
E. coli     4 SNRIKLTWISFLSYA-----LTGALVIVTGMV------MGNIADY------FNLPV-SSMSNTFT 50

  Fly   103 WSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWG--- 164
            :.:|  |.::|.|...:::..:|...      .||           |.||:.|.|..|.::.   
E. coli    51 FLNA--GILISIFLNAWLMEIVPLKT------QLR-----------FGFLLMVLAVAGLMFSHSL 96

  Fly   165 --LCAVRFIQGLGEGPIVPCTHAMLAKWIPPNER-SRMGAAVYAGAQF---GTIISMPLSGLLAE 223
              ..|..||.|:..|..:.....::.:.....:| ||:   ::..:.|   |.|..|..:.|||.
E. coli    97 ALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRL---LFTDSFFSMAGMIFPMIAAFLLAR 158

  Fly   224 YGFDGGWPSI--FYVFGIVGTVW-SIAFLIFVHEDPS--SH-PTID---EREKKYINDSLWGTDV 279
                    ||  ::|:..:|.|: :|..|.|..|.|:  .| |..|   |:||       ||..|
E. coli   159 --------SIEWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEK-------WGIGV 208

  Fly   280 VKSPPIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSS---LPYL 341
                      :..|:.....:...:|       .::.:|.|.|. |..||...|.|.|   :.|:
E. coli   209 ----------LFLSVAALCYILGQLG-------FISWVPEYAKG-LGMSLNDAGTLVSNFWMSYM 255

  Fly   342 -AMWLFSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGV 405
             .||.||..:           ||..  .::::..:.  |....|:....||....:..:||.:|.
E. coli   256 VGMWAFSFIL-----------RFFD--LQRILTVLA--GLAAILMYVFNTGTPAHMAWSILALGF 305

  Fly   406 GLNGGIYS-----GFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLI--SDPSKPMM-- 461
             .:..||:     |.:...:. :|:...|:::   | ..:..:|..:..|.::  |.|...::  
E. coli   306 -FSSAIYTTIITLGSQQTKVP-SPKLVNFVLT---C-GTIGTMLTFVVTGPIVEHSGPQAALLTA 364

  Fly   462 -GQWQIVF---FIAAFV 474
             |.:.:||   |:..||
E. coli   365 NGLYAVVFVMCFLLGFV 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 101/469 (22%)
tsgANP_417823.1 PRK03699 2..393 CDD:235151 102/472 (22%)

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