DRSC/TRiP Functional Genomics Resources

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Protein Alignment Picot and garP

DIOPT Version :10

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_417596.1 Gene:garP / 947642 ECOCYCID:EG12760 Length:444 Species:Escherichia coli


Alignment Length:465 Identity:112/465 - (24%)
Similarity:195/465 - (41%) Gaps:83/465 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAW 103
            |||.:..::|:..|..|..|..:|:|...:..                             |...
E. coli    15 TRYLILLIIFIVTAVNYADRATLSIAGTEVAK-----------------------------ELQL 50

  Fly   104 SSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFL------VPVAARGGGV 162
            |:...|||.|:|.:.|::.|||.|.|..|:||.:...|.:...|:|.||      .|:|..|..:
E. coli    51 SAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISM 115

  Fly   163 WGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFD 227
            :   .:||:.|..|.|..|....::|.|.|..||....|...:...|...:..||.|.|.   |.
E. coli   116 F---FMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLT---FA 174

  Fly   228 GGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDS---------LWGTDVVKSP 283
            .||..:|.|.|::|.|.:..::..:| :|:.||.:...|.|:|:::         ..|:.....|
E. coli   175 WGWEHVFTVMGVIGFVLTALWIKLIH-NPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGP 238

  Fly   284 PIPF-KAIIKSLPFYAILFAHMGHNYGYETL----MTELPTYMKQVLRFSLKSNGLLSSLPYLAM 343
            .:.: |.::.:.....:.|.    .|...|:    :|..|.|:.|....|:...||::|:|.|..
E. coli   239 KLHYIKQLLSNRMMLGVFFG----QYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCG 299

  Fly   344 WLFSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCD--RALTLAILTIGVG 406
            :...:...|.:|::| .:..|.|..|||...:|.      |:|::...|:  ...||.::.:.:.
E. coli   300 FAGGVLGGVFSDYLI-KRGLSLTLARKLPIVLGM------LLASTIILCNYTNNTTLVVMLMALA 357

  Fly   407 LNGGIYS--GFKINHLDLTPR-FAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVF 468
            ..|..:.  |:.:.. |..|: ..|....:.|...|:|.::.|:..|:|:|          ::..
E. coli   358 FFGKGFGALGWPVIS-DTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVS----------ELHS 411

  Fly   469 FIAAFVYIIC 478
            |.||.|::.|
E. coli   412 FNAALVFVGC 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 110/463 (24%)
garPNP_417596.1 2A0114 25..434 CDD:273326 108/455 (24%)

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