DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and slc17a9a

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_001336574.1 Gene:slc17a9a / 799506 ZFINID:ZDB-GENE-081021-1 Length:458 Species:Danio rerio


Alignment Length:464 Identity:111/464 - (23%)
Similarity:188/464 - (40%) Gaps:67/464 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAWSSALQ 108
            |.||.|.....:..|..|.:..|.|..                             ||.||....
Zfish    50 TLMLLLVTCVLHWSRMAMPICAVTMAR-----------------------------EFEWSKTET 85

  Fly   109 GYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGG--GVWGLCAVRFI 171
            |.:|.:||:||..||:..|..:.:.|..|.|........:...|.|:.|:.|  .:..:.|.||:
Zfish    86 GMVLGAFFWGYCFTQVVGGHASDRIGGERVLLLSTSSWGIMTALTPILAKTGLSPLLTMTASRFL 150

  Fly   172 QGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYV 236
            .|:.:|...|...::.::.:...||..:.:.:..|...|.::...:..|:.::   .||.|:||.
Zfish   151 LGVMQGVHYPSLVSICSQRVTEGERGLLMSTLACGCYLGMMLVGGVGSLMLDW---FGWQSVFYG 212

  Fly   237 FGIVGTVWSIAF--LIFVHEDPSSHPTIDEREKKYINDSLW--GTDVVKSPPIPFKAIIKSLPFY 297
            .|::...|:...  .:....|.|.             ||||  ..||.:|..|.:..:::....:
Zfish   213 AGLLAVFWACCVWKCLLQGTDISL-------------DSLWISRKDVSESSRINWLYLLREPSVW 264

  Fly   298 AILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKR 362
            |::.||:..:..|.|||:.|||:.|..  |....:.:.:.:|:......|:|...::|.:| .:.
Zfish   265 AMIIAHLCFSSSYYTLMSWLPTFFKDT--FPHAKDWVFNVIPWFVALPTSLFGGSISDHLI-RQG 326

  Fly   363 FSHTATRKLINSIGQYGPGVALIAASYTGCDRA---LTLAILTIGVGLNGGIYSGFKINHLDLTP 424
            ....|.|||:.....   |||.:...:. |..:   ..:|.:::.:||:....||..:|..|..|
Zfish   327 CGTAAVRKLMQFCSM---GVASVFILFL-CKTSSFIQAVACVSVTIGLSTFHNSGVSVNVNDQAP 387

  Fly   425 RFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGSGE 489
            ..||.|..:.|..|...|||....:|::|.     :.|.|..||.:.|.|.:|....:...|..:
Zfish   388 SCAGALYGVMNTCAAFTGLLMVYISGYMIE-----VTGSWVNVFSVLALVNVIGVAVFITLGEAK 447

  Fly   490 R-QYWDNPE 497
            | ...|.||
Zfish   448 RIDQLDEPE 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 111/464 (24%)
MFS 100..485 CDD:119392 98/393 (25%)
slc17a9aXP_001336574.1 MFS 50..443 CDD:119392 106/449 (24%)
MFS_1 53..407 CDD:284993 93/405 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.