DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and si:ch1073-513e17.1

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_005159826.1 Gene:si:ch1073-513e17.1 / 571066 ZFINID:ZDB-GENE-030131-7188 Length:508 Species:Danio rerio


Alignment Length:480 Identity:177/480 - (36%)
Similarity:268/480 - (55%) Gaps:25/480 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PQRCFATRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPI---- 93
            |.:|.:.|..:..|:|.|.|..|.:|.|:|||:|||||.|..:........:||     |.    
Zfish    34 PPKCCSVRCNLAVMMFFGFAVVYGLRVNLSVAMVAMVNGTNDQPSSNSSISNEC-----PAPSPA 93

  Fly    94 --DDSQDGE-------FAWSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVF 149
              ::||..|       :.|:|..||.:|.:||:||:.||||.|.|:.::|...|||.|:|..::.
Zfish    94 HNNNSQSSEQPEGIPRYPWNSETQGMLLGAFFFGYLFTQIPGGYLSGRFGGSLFLGGGVLGTALL 158

  Fly   150 AFLVPVAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIIS 214
            ..|.|::|:.|..| |.|:|.::|.|||...|...||.|:|.||.||:|:.....||:.||..::
Zfish   159 TLLTPLSAQLGAKW-LFALRALEGFGEGVTFPAMMAMWARWAPPLERARLMTFSGAGSSFGAFVA 222

  Fly   215 MPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGTDV 279
            :||:|.:..   ..|||::||..|..|.:|::.:.|.|.::|.:||.|..:||.||.:||.....
Zfish   223 LPLTGFICH---SLGWPAVFYSCGGAGCLWAVFWFILVSDEPRTHPRITVQEKDYIINSLGQQGT 284

  Fly   280 VKSPPIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMW 344
            .....:|..:::.|:|.:||:...|..|:.|.||:|.||.||..||.|.|:.|..||:|||||.|
Zfish   285 AHGWSVPVWSMLFSMPLWAIIIPQMCSNWSYYTLLTSLPIYMDTVLHFDLRQNSFLSALPYLAGW 349

  Fly   345 LFSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNG 409
            |||:...|:||.::..:..|.||.||:...||.:.|...|:|..::||...|.:..||:.....|
Zfish   350 LFSVGSGVLADNLLEKEILSVTAVRKIFTFIGLFLPAAFLLAVGFSGCSGVLAVTFLTLSSAFGG 414

  Fly   410 GIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFV 474
            ...:|..||.:|:.||:||.|:.|||....:.|:||||..|:...:.|   :..|:.||:::|.|
Zfish   415 FSAAGVFINQIDIAPRYAGMLLGITNTFGTIPGVLAPIVVGYFTKNHS---VSGWRNVFWLSAGV 476

  Fly   475 YIICGTFYNIFGSGERQYWDNPEDD 499
            ......||.|||:|:.|.|...:::
Zfish   477 SAFGAIFYVIFGTGKIQSWARTDEE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 174/472 (37%)
MFS 100..485 CDD:119392 147/391 (38%)
si:ch1073-513e17.1XP_005159826.1 2A0114euk 32..500 CDD:129972 177/477 (37%)
MFS 112..487 CDD:119392 146/381 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582635
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - mtm6607
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

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