DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and vht1

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_594801.1 Gene:vht1 / 2542518 PomBaseID:SPAC1B3.16c Length:568 Species:Schizosaccharomyces pombe


Alignment Length:565 Identity:109/565 - (19%)
Similarity:186/565 - (32%) Gaps:181/565 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 CFATRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGE 100
            |....||::..|...::.::.|.|..        .|:.|::                        
pombe    88 CLWILYFLSCCLRFTVSLSFTMNTAQ--------GHSLIQT------------------------ 120

  Fly   101 FAWSSALQGYI-------LSSFFYGYVITQIPFGILAKKYGSLRFL-------GYGMLINSVFAF 151
                  |.||.       |:.|:.||:|.::|..::      :.|:       ...:.|..|.|.
pombe   121 ------LSGYSAHYLALGLALFYVGYIIFEVPSNLM------MAFIEPRIWVSRIQLTIGVVGAC 173

  Fly   152 LVPVAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQF-GTIISM 215
            ...:..:.|......|:||..|:.|..:.|.....:::|.......:.....|..||. ...:|:
pombe   174 HAVLGTKHGNAQSYVALRFFLGVAESGLWPGLAYYMSRWYRGKHLGKRIGWYYTAAQIAAAAVSL 238

  Fly   216 PLSGLLAEYGFDG--GWPSIFYVFGIVGTV-------WSIAFLIFVHEDPSSH------------ 259
            ..:|.....|..|  |:..:|.::|:|...       |..|.....|....|.            
pombe   239 VSAGFQKMDGARGLYGYQWMFLIWGVVAIAQALSIPWWLPAVASKEHRKSLSSFIPLPKWMKTLS 303

  Fly   260 --------PTIDEREKKYINDSLWG-----TDVVKSPPIPFKAIIKSLPFYAILFAHMGHNYG-- 309
                    |.......:||.:...|     :|::||     ...::..||..:.|..:|...|  
pombe   304 PQRIGFLTPADKSLHSRYIAEMNVGKRWQWSDLLKS-----CLDLRVWPFILMYFGIVGVGNGIF 363

  Fly   310 -YETLMTE--LPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSM--FISVVADWMISSKRFSHTATR 369
             |.||:.|  .|::           :|:..||....:||...  .::|:..:....|:||.....
pombe   364 NYCTLIIEEINPSF-----------SGIDISLLNAPIWLADALGIVTVMPLYDRFHKKFSFFTGS 417

  Fly   370 KLI----NSIGQYGP-------GVALI-------------------AASYTGCDRALTLAILTIG 404
            .||    .::..|.|       |:.:|                   |.:|.....|.:||::| |
pombe   418 CLIIIAGLAVANYAPRAWSRYGGLLMIGFGLGPTVPICMAWCSASMAKTYGDVGVASSLALVT-G 481

  Fly   405 VGLNGGI------YSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQ 463
            :|..|.:      |||:        |....|..|...|.| |.| ::.||.|             
pombe   482 LGNLGSVVTTYALYSGW--------PGDPTFRKSNDVCIA-LIG-VSIIACG------------- 523

  Fly   464 WQIVFFIAAFVYIICGTFYNIFGSGERQYWDNPEDDEQKPALQTT 508
              |.|.:....:   |.|...|.:.:.:..|..|..:.||||.::
pombe   524 --IEFLLDKTGF---GQFNASFNNHDHEVEDEQEMTDIKPALPSS 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 104/551 (19%)
MFS 100..485 CDD:119392 94/476 (20%)
vht1NP_594801.1 HpaX 80..503 CDD:131385 89/483 (18%)
MFS 94..493 CDD:119392 83/459 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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