DRSC/TRiP Functional Genomics Resources

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Protein Alignment Picot and cima-1

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:502 Identity:108/502 - (21%)
Similarity:217/502 - (43%) Gaps:47/502 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAWS 104
            |..:..||........:..:|::||::.|.:               |     |: ....|...|.
 Worm    67 RLMLAAMLCCCFITLSISSSNLAVALICMTS---------------C-----PV-HGYGGTLEWQ 110

  Fly   105 SALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLCAVR 169
            |..:|.:|::...|.:| .|..|:.|.:......:..|:|:..:...::|:.| ....|.....|
 Worm   111 SQQEGLVLAAQNAGSLI-MIVTGMWADRLNGKWMVFIGLLLCCIGNLMLPLLA-SKSFWFAVLAR 173

  Fly   170 FIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSG-LLAEYGFDGGWPSI 233
            ...|..:..::|..::::.:|.|..||......:..|.|.||:..:|.:| |........|||:|
 Worm   174 ISIGASDACLMPAVNSLITRWFPQAERPAAIGLISGGRQIGTLFILPTAGYLCTRKDILDGWPAI 238

  Fly   234 FYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYIN-----DSLWGTDVVKSPPIPFKAIIKS 293
            ||:...:..:.::.::.|..:.|:....|..|||::|.     :|: |....::..:|:.|::.|
 Worm   239 FYLSATISVLVTVFWIPFGADKPAKQICISSREKEFIETRIACESI-GKRTDRTRRVPYGAMLHS 302

  Fly   294 LPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMI 358
            .|.:|.:||.:.|.|....::..||.||:.||.|:...||::::||.|.::|...|.|.::.::.
 Worm   303 KPLWACIFALICHEYPLVIMLQFLPNYMRDVLEFAPTKNGIIAALPILCLFLSKTFSSSLSSYLT 367

  Fly   359 SSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYS-GFKINHLDL 422
            :..|...|...|..|::...|..:.:....:...:.|........|..:..|::: |.....:.:
 Worm   368 TKLRLDKTFVCKGFNAVASAGLAICISFVPFFNKESAFLAVFCLCGAMIFAGLHTPGVITAMVQI 432

  Fly   423 TPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGS 487
            .|.|:|.:...:..:.....:...|...:::...|   :.:|.:||.::|.|..:....:.|:||
 Worm   433 APAFSGIITGWSFFAVAWFSIGNKILTKYIVQSGS---VTEWGMVFRVSALVAALPVIVFTIWGS 494

  Fly   488 GERQYWDNPED-------------DEQKPALQTTVTTSPARLSNGST 521
            .:|::|..|..             |..:...:.|.:||..:.|..|:
 Worm   495 ADREWWAAPSSKCSVASFHRPSIRDRSREMSRATSSTSLGQQSRVSS 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 102/479 (21%)
MFS 100..485 CDD:119392 86/391 (22%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 102/465 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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