DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and Slc17a2

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_006516709.1 Gene:Slc17a2 / 218103 MGIID:2443098 Length:480 Species:Mus musculus


Alignment Length:470 Identity:144/470 - (30%)
Similarity:234/470 - (49%) Gaps:31/470 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDD--------- 95
            ||.:..::..........|.::|:||:||||.|       :..|......:.|:.|         
Mouse    17 RYALALIMHFSNFTMITQRVSLSIAIIAMVNST-------QHQDPANASTEGPVMDLLSNQSRGI 74

  Fly    96 ----SQDGEFAWSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVA 156
                ::...:.||:..||.|.||..||.::|.||.|.||..:|:.:.||.|:||:|:.....|:|
Mouse    75 KDFSTRAAVYQWSTETQGIIFSSISYGIILTLIPSGYLAGIFGAKQILGAGLLISSLLTLFTPLA 139

  Fly   157 ARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGT--IISMPLSG 219
            | ..||..:..:|.:||:.:|........:.|||.||.|||::.:...:|...|:  ::..||.|
Mouse   140 A-DFGVILVIVIRTVQGMAQGMAWTGQFTIWAKWAPPLERSKLTSIAGSGEDVGSVWVLHHPLCG 203

  Fly   220 LLAEYGFDGGWPSIFYVFGI-VGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGTDVVKSP 283
            .:...|..    ..||:..: :|.|..:.:...:::||..||.|..|||::|..|:.........
Mouse   204 RINLTGTG----LAFYLLHLCIGCVCCVLWFTVIYDDPMHHPCISVREKEHITSSVAQQSSSPRR 264

  Fly   284 PIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSM 348
            .:|.||:::.||.:||......|.:....::|.||||:..||..:::.:|:|||||::|....::
Mouse   265 SVPIKAMVRCLPLWAIFMGFFSHFWLCTIIITYLPTYISTVLHVNIRDSGVLSSLPFIAASSCTI 329

  Fly   349 FISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYS 413
            ....:||:::|....|....|||.:|:|...|.:..:|..:.......|:.:|.:..|.:....|
Mouse   330 LGGQMADFLLSRNLLSLITVRKLFSSLGLLLPSLCAVALPFVTSSYIATIVLLILIPGTSNLCDS 394

  Fly   414 GFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIIC 478
            ||.||.||:.||:|.|||.|:......||:::....|.|||..|:   ..|:.|||::|.|.:..
Mouse   395 GFIINTLDVAPRYASFLMGISRGFGLTAGIISSTTTGFLISQDSE---SGWRNVFFLSAAVNMFG 456

  Fly   479 GTFYNIFGSGERQYW 493
            ..||.|||..|.|.|
Mouse   457 LIFYLIFGQAEIQSW 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 143/469 (30%)
MFS 100..485 CDD:119392 124/387 (32%)
Slc17a2XP_006516709.1 MFS_SLC17 21..464 CDD:340876 137/457 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838810
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.740

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