DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and T11G6.4

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_502010.3 Gene:T11G6.4 / 188431 WormBaseID:WBGene00011719 Length:499 Species:Caenorhabditis elegans


Alignment Length:489 Identity:98/489 - (20%)
Similarity:158/489 - (32%) Gaps:166/489 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RYFVTFMLFLGMANAYVMRTNMSVAIVAMV-----NHTAIKSGEAEEYDDECGDRDIPIDDSQDG 99
            :|.|....|...|..:..|..::....:::     |.|.....|:||:                 
 Worm    26 QYIVFIHTFFSFAMIHATRKTLATVKPSIIHTWTSNSTGTPFMESEEH----------------- 73

  Fly   100 EFAWSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSV----FAFL-------- 152
                ::...|.:.:||...|.|.....|.|...|...:.|.:||.::::    |.||        
 Worm    74 ----ATRFLGVLDTSFMITYAIGLFVSGTLGDHYNPRKMLSFGMAMSAISVFCFGFLTEKYHFYS 134

  Fly   153 VPVAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSR-MG---AAVYAGAQFGTII 213
            .|:..   .:| :|. .|.|.:|    .|...|::..|...:.|.. ||   |....|...||:|
 Worm   135 APLYI---FLW-ICN-GFSQSVG----WPIEVAIMGNWFGKDARGTVMGIWSACGSTGNIIGTLI 190

  Fly   214 SMPLSGLLAEYGF------DGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDERE------ 266
            :.....|..||.|      ..|:..|.| :.:....|.|.     |..|......:::|      
 Worm   191 ASHALSLGYEYPFLIICSLLLGYSMIVY-WQLPSAPWDID-----HSFPHDSENKEKQELLPNRP 249

  Fly   267 -----------------------KKYINDS--LWGTDVVKSPPIPFKAIIKSLPFYAILFAHMGH 306
                                   .|::||.  .|                  ||:|    .|.|.
 Worm   250 PALGFFKTWLIPGVISFSLAFACLKFVNDGFFFW------------------LPYY----LHDGL 292

  Fly   307 NYGYETLMTELPTY------------------MKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVV 353
            |:. ||....|.|:                  ||.  |.||....|::|  :::::::|.     
 Worm   293 NWP-ETFADALSTWYDVGGILASVVAGAASDRMKS--RTSLIFYMLIAS--FVSLYIYSQ----- 347

  Fly   354 ADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYT----------GCDRAL-TLAILTIGVGL 407
                 |...:|..|...|:......|| :.:|::|..          |...|| |:..:..|.|.
 Worm   348 -----SPASYSWNAFLLLVTGFCVGGP-LNMISSSVVADLGKSDKLKGNAEALATVTGIIDGTGS 406

  Fly   408 NGGIYSGFKINHLD----LTPRFAGFLMSITNCS 437
            .|.....|.|.:|.    ....|.|| |::..|:
 Worm   407 CGSAIGQFMIPNLQHWYGWNSVFYGF-MAMMACT 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 98/488 (20%)
MFS 100..485 CDD:119392 88/424 (21%)
T11G6.4NP_502010.3 MFS 28..447 CDD:391944 97/487 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160323
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.