DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and F10C2.7

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_506020.2 Gene:F10C2.7 / 184290 WormBaseID:WBGene00008647 Length:458 Species:Caenorhabditis elegans


Alignment Length:474 Identity:113/474 - (23%)
Similarity:187/474 - (39%) Gaps:84/474 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDG----- 99
            ||.|   :|||:|....:.:|..:     :|.|.|..     .||..|     |:.:::|     
 Worm     9 RYIV---VFLGLACLTSILSNYII-----INFTFICM-----KDDPTG-----IETTENGTIYNR 55

  Fly   100 ---------EFAWSSALQGYILSS--FFYGYVI--TQIPFGILAKKYGSLRFLGYGMLINSVFA- 150
                     ...|:.|: |.||.:  ..|.||.  .:|||.|..              |.|.|| 
 Worm    56 YDYSVAEKSAIVWAVAI-GTILGTGPINYSYVRFGARIPFFIAG--------------IVSAFAT 105

  Fly   151 FLVPVAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISM 215
            .|.|..|..|..: |.|:||.|||...........:..:|.|..:.....:.:.:.:...|:::.
 Worm   106 VLTPYGAYLGLPY-LLALRFAQGLAYSADFAAIGIVCVRWAPLAQTGLFISILTSFSPAATVMTN 169

  Fly   216 PLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGTDVV 280
            ..||.|.:..:  ||.|.|||....|.:...|:|.|.::||..:..:..:|...|........:.
 Worm   170 AASGWLCKSSY--GWQSAFYVHAAAGFIIFAAWLYFYNDDPQLNQKVSAKELTTIQKDKTKAHIE 232

  Fly   281 KSPPIPFKAIIKSLPFYAILFAHMGHNYGYET---LMTELPTYMKQVLRFSLKSNGLLSSLPYLA 342
            :...:|:..|.|:   ..||...:...:...|   |:|..|.|.::||.||:...|:|.||..:|
 Worm   233 RDSFVPYWEICKN---RVILTVWINSFFEMTTLILLLTYSPIYFRKVLDFSVVETGMLISLSAVA 294

  Fly   343 MWLFSMFISVVADWMISSKRFSHTATRKLI---NSIGQYG---PGVALIAAS--YTGCDRALTLA 399
                .|...:::.| :|.::|.....|...   :|:|..|   ..:|.|..|  ||.   .:..:
 Worm   295 ----HMPAKLLSGW-LSDRQFLSERVRMWFFNTSSVGLAGFMCVSLAYIPVSWKYTS---VIMFS 351

  Fly   400 ILTIGVGLN-GGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQ 463
            |:...:|.| ||.|.....    .:.::|.|::::......:|...||......:||.|...  |
 Worm   352 IVYTLMGTNCGGFYKCGTF----ASRQYAHFVLAMIQFMKCIALFAAPATVAIFVSDESSHT--Q 410

  Fly   464 WQIVFFIAAFVYIICGTFY 482
            |..|:.:...:..|....:
 Worm   411 WGHVYILNGLLMFIANILF 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 112/473 (24%)
MFS 100..485 CDD:119392 97/400 (24%)
F10C2.7NP_506020.2 MFS 10..429 CDD:391944 112/471 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.