DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and slc-17.7

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_505399.1 Gene:slc-17.7 / 179308 WormBaseID:WBGene00022788 Length:506 Species:Caenorhabditis elegans


Alignment Length:506 Identity:128/506 - (25%)
Similarity:226/506 - (44%) Gaps:65/506 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VWNQRNLHESLEQQPQRCFATRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGE----- 78
            :|:.|::              |..|...:.|.:....:||:|:::|||.|:|.||:..|:     
 Worm     7 LWSLRSV--------------RLRVVIAIALALTIEGLMRSNLNMAIVCMLNSTALTDGKPMIAS 57

  Fly    79 ----AEEYDDEC-----GDRDIPIDDSQDGEFAWSSALQGYILSSFFYGYVITQIPFGILAKKYG 134
                .|.....|     |:..:.   ...|...|:|..:..|.::|:.|.::..:...:|.:..|
 Worm    58 LNTSIEPATPLCPLLQFGESKVV---EHKGTIFWTSQDRAIIFAAFYAGGLVATLASEVLNRYIG 119

  Fly   135 SLRFLGYGMLINSVFAFLVPVAA--RGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERS 197
            :.|.:.||.:.|.|..||.|..|  ...|.:.:..:||:.|.|:|.:.||...::|:|.|.||:|
 Worm   120 ATRSVLYGGIANVVGTFLTPFVASQTNFGTFPIILLRFVMGFGQGVLWPCMLVLIAQWFPVNEKS 184

  Fly   198 RMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTI 262
            ...|....|.|...:|:|..:..|.:..:  |||..|:|:.:.|.|..|.:.:.|::.|.     
 Worm   185 TALAIATTGNQLSVVIAMFATAELCQLPW--GWPMAFHVYAVCGIVMCIIWYMMVYDSPC----- 242

  Fly   263 DEREKKYINDSLW--GTDVVK-SPPIP-FKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQ 323
             ..:||...|.|.  .|:.|: .|..| :.|::||...:||..:...|||.....:|.||.|.|.
 Worm   243 -HADKKLSRDELHYITTERVRLRPQHPNWMALMKSPVVWAIAASSFAHNYVTVGTITYLPLYYKT 306

  Fly   324 VLRFSLKSNGLLSSLPYLAMWLFSMFISVVA------DWMISSKRFSHTATRKLINSIGQYGPGV 382
            ||..||.||||.|:||::...:..:|.:.:|      ||...::      ..|..||...:  |:
 Worm   307 VLNMSLTSNGLWSALPFVLQLISKVFYAGMAESARKRDWSDINR------ITKFCNSSASF--GI 363

  Fly   383 ALIAASYTGCD---RALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLL 444
            |:.......||   |...:.::.:.:....|...|:..:.:.:.|.....:.:.:.....:|..:
 Worm   364 AICFGLLCLCDCSQRGAAIFLICLAMCFVSGYIPGYNTSAVTIAPGQTAAIAAFSRFWGQIASSV 428

  Fly   445 APIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGSGERQYWDN 495
            ||.   |:.:...:....:|:|||.:.|.:.::.|.|:...|:...|.||:
 Worm   429 APY---HIGAYTKQGTADEWKIVFAVIAAICVVTGIFFQCCGTASLQDWDS 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 125/484 (26%)
MFS 100..485 CDD:119392 104/399 (26%)
slc-17.7NP_505399.1 MFS 31..467 CDD:391944 119/457 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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