DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and slc-17.2

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_499065.1 Gene:slc-17.2 / 176317 WormBaseID:WBGene00008000 Length:493 Species:Caenorhabditis elegans


Alignment Length:473 Identity:168/473 - (35%)
Similarity:261/473 - (55%) Gaps:12/473 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ESLEQQPQRCFATRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDI 91
            |....:|:...:||:.::.::|.|....|:||||||.|:|.|||..  |:....|....||....
 Worm     2 EGATTKPRLVPSTRFALSLVMFFGCLVTYMMRTNMSFAVVCMVNEN--KTDTGVEKVSRCGKEMT 64

  Fly    92 PIDDSQD--GEFAWSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVP 154
            |::.:..  |||.|.....|.:||||||||:.:||..|.||.:||..|.:...:|.:::...|.|
 Worm    65 PVESNSSVIGEFDWDKQTTGMVLSSFFYGYIGSQIIGGHLASRYGGKRVVFVTILGSALLTLLNP 129

  Fly   155 VAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSG 219
            |||| ...:.|..:|...|..:|...|..|.|.:.|.||.|.|.:....|||||.|.:|.:||||
 Worm   130 VAAR-TSEYALAILRAAIGFLQGATFPAMHTMWSVWGPPLELSVLTGVTYAGAQIGNVIVLPLSG 193

  Fly   220 LLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYI---NDSLWGTDVVK 281
            .|.|||||||||||||:.|:.|.:|:..:.....:.|::||.|...||:||   .::..|.|..|
 Worm   194 FLCEYGFDGGWPSIFYIIGVFGVLWTAVWWYVSSDKPATHPRITPEEKQYIVTAVEASMGKDTGK 258

  Fly   282 SPPIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLF 346
            .|..|:..|:.|...:|....|...::|..|::..||:::|.||..:|.|.|.::|:||:|.:|.
 Worm   259 VPSTPWIKILTSPAVWACWAGHFAGDWGAYTMLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFLA 323

  Fly   347 SMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDR-ALTLAILTIGVGLNGG 410
            .....|:||.:.|....|...||:....:...|.|:.|:|:.|.||.: .|.:..:|.|:.::|.
 Worm   324 INAGGVLADTLRSKGILSTLNTRRAAMLVALIGQGIFLVASGYCGCGQDVLVIIFITCGMAISGL 388

  Fly   411 IYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVY 475
            .|:||.:|:|::.|.|:|.:|...|..:.|||:::|..:.:|..:.::.   :||:|.::.|.:.
 Worm   389 QYAGFVVNYLEIAPPFSGTVMGTGNTISALAGIISPAVSSYLTPNGTQE---EWQMVLWLTAGIL 450

  Fly   476 IICGTFYNIFGSGERQYW 493
            .|....::||.|||.|.|
 Worm   451 TIGALLFSIFASGEVQPW 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 164/459 (36%)
MFS 100..485 CDD:119392 137/388 (35%)
slc-17.2NP_499065.1 2A0114euk 4..475 CDD:129972 167/471 (35%)
MFS 70..461 CDD:119392 139/394 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 270 1.000 Domainoid score I959
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D378598at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.820

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