DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and eat-4

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_499023.3 Gene:eat-4 / 176291 WormBaseID:WBGene00001135 Length:576 Species:Caenorhabditis elegans


Alignment Length:506 Identity:151/506 - (29%)
Similarity:248/506 - (49%) Gaps:47/506 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAWS 104
            |:.:..:..:|...::.:|.|...|          |:...:.|.|       |.......||.|:
 Worm    69 RWLLAILANMGFMISFGIRCNFGAA----------KTHMYKNYTD-------PYGKVHMHEFNWT 116

  Fly   105 SALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLCAVR 169
            ......:.||:||||::||||.|.||.|:...:..|:|:.:.:....|:|...:....:.:..::
 Worm   117 IDELSVMESSYFYGYLVTQIPAGFLAAKFPPNKLFGFGIGVGAFLNILLPYGFKVKSDYLVAFIQ 181

  Fly   170 FIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIF 234
            ..|||.:|...|..|.:...|.||.|||::....:.|:..|.::.:|||..|..|   ..|.:.|
 Worm   182 ITQGLVQGVCYPAMHGVWRYWAPPMERSKLATTAFTGSYAGAVLGLPLSAFLVSY---VSWAAPF 243

  Fly   235 YVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGTD----VVKSPPIPFKAIIKSLP 295
            |::|:.|.:|:|.:.....|.|:.||||.:.||.:|.|::....    .::|  ||:|||:.|.|
 Worm   244 YLYGVCGVIWAILWFCVTFEKPAFHPTISQEEKIFIEDAIGHVSNTHPTIRS--IPWKAIVTSKP 306

  Fly   296 FYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISS 360
            .:||:.|:...::.:..|:....||||:.|...:..:|||:::|:|.|....:....:||::.|:
 Worm   307 VWAIIVANFARSWTFYLLLQNQLTYMKEALGMKIADSGLLAAIPHLVMGCVVLMGGQLADYLRSN 371

  Fly   361 KRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPR 425
            |..|.||.||:.|..|..|....::..:||..|....:|::. .||::|...|||.:||||:.||
 Worm   372 KILSTTAVRKIFNCGGFGGEAAFMLIVAYTTSDTTAIMALIA-AVGMSGFAISGFNVNHLDIAPR 435

  Fly   426 FAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGSGER 490
            :|..||..:|....||||..|... ...:..||   ..|..||.:|:.::....|||.::.|||.
 Worm   436 YAAILMGFSNGIGTLAGLTCPFVT-EAFTAHSK---HGWTSVFLLASLIHFTGVTFYAVYASGEL 496

  Fly   491 QYWDNPEDDEQ----------------KPALQTTVTTSPARLSNGSTAPAA 525
            |.|..|:::|:                ..|.:||.|..||.:.:...|.||
 Worm   497 QEWAEPKEEEEWSNKELVNKTGINGTGYGAAETTFTQLPAGVDSSYQAQAA 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 140/463 (30%)
MFS 100..485 CDD:119392 126/388 (32%)
eat-4NP_499023.3 2A0114euk 66..497 CDD:129972 138/454 (30%)
MFS 110..492 CDD:119392 126/391 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100421
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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