DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and vnut-1

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_497007.1 Gene:vnut-1 / 175106 WormBaseID:WBGene00010758 Length:445 Species:Caenorhabditis elegans


Alignment Length:468 Identity:109/468 - (23%)
Similarity:195/468 - (41%) Gaps:70/468 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAWSSALQ 108
            |..:|.|....|..|.::.::..|:..                             ||||:....
 Worm    25 TITMFSGTCVLYASRASLPISAAAVAK-----------------------------EFAWNKTDS 60

  Fly   109 GYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWG------LCA 167
            |.:||.||:||.:||:..|.:|.|||:.:.|.|..|..::..|..| .......|.      |.|
 Worm    61 GTVLSCFFWGYALTQVFAGRIADKYGAEKILPYSSLAWTMLTFFTP-HLFDFAYWTNYPLVVLLA 124

  Fly   168 VRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPS 232
            ||.:.|:.:...:|...::::|.:...::.|:...|.||:.:||:::..:..:|.|:   .||.:
 Worm   125 VRILTGVCQAFHIPSLASIVSKHLAAADKGRVFGIVLAGSHWGTVLAGAIGSILIEW---IGWRA 186

  Fly   233 IFYVFGIVGTVWSIAF--LIFVHEDPS--SHPTIDER---EKKYINDSLWGTDVVKS-------- 282
            :|...||:..:|...|  ::...:.|.  |.|..||.   :||:        |.::|        
 Worm   187 LFQFVGIISLIWCWVFRWVLDRAKGPGGRSSPLPDEEVLLDKKH--------DTIESHLAATSPC 243

  Fly   283 PPIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFS 347
            |.:|:..:.:...|:|...|.......|..|...||:|..:.  |......:.:.:|.||:.:.|
 Worm   244 PSVPWGTLFRHPAFWAAAVAQYTGGNSYSILFNWLPSYFHET--FPTAKGFVYNVVPSLAIVVTS 306

  Fly   348 MFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIY 412
            :...|:|...:|..: :.|.||||:......|....|:....|. ...::|.|.|:.:...|..:
 Worm   307 LVAPVMASRALSEGK-TVTYTRKLMEGASLLGIAFCLMLVPMTS-SFWISLIIFTMAMAARGLHH 369

  Fly   413 SGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYII 477
            .|..:|..|..|..||.:..:.|....:.|.:....|||::...:    ..|..||.:.|...::
 Worm   370 GGVSVNPHDFAPNHAGSVFGVFNACGAITGFVGVYIAGHILEATN----NNWSYVFVVTAAQCVV 430

  Fly   478 CGTFYNIFGSGER 490
            ....|.:.|:|::
 Worm   431 GAMVYTLLGTGQK 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 109/468 (23%)
MFS 100..485 CDD:119392 101/405 (25%)
vnut-1NP_497007.1 MFS_SLC17A9_like 25..439 CDD:340938 107/462 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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