DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and Slc17a6

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_543129.3 Gene:Slc17a6 / 140919 MGIID:2156052 Length:582 Species:Mus musculus


Alignment Length:524 Identity:176/524 - (33%)
Similarity:274/524 - (52%) Gaps:52/524 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FRRSSLNHRHRDGHVLVWNQRNLHESLE--------QQPQR--------CFA--TRYFVTFMLFL 49
            |...||...:|   ||...|.| .|::|        :.|::        ||.  .||.:..|..|
Mouse    19 FAGKSLGQIYR---VLEKKQDN-RETIELTEDGKPLEVPEKKAPLCDCTCFGLPRRYIIAIMSGL 79

  Fly    50 GMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAWSSALQGYILSS 114
            |...::.:|.|:.||||.|||::.|..          |.:.|    .:..:|.|.....|.|..|
Mouse    80 GFCISFGIRCNLGVAIVDMVNNSTIHR----------GGKVI----KEKAKFNWDPETVGMIHGS 130

  Fly   115 FFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLCA--VRFIQGLGEG 177
            ||:||:|||||.|.:|.:..:.|..|..:|:.|....|:|.|||   |...|.  ||.:|||.||
Mouse   131 FFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAAR---VHYGCVIFVRILQGLVEG 192

  Fly   178 PIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGT 242
            ...|..|.:.:||.||.||||:....:.|:..|.:|:|||:|:|.:|   .||.|:|||:|..|.
Mouse   193 VTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQY---TGWSSVFYVYGSFGM 254

  Fly   243 VWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGT----DVVKSPPIPFKAIIKSLPFYAILFAH 303
            ||.:.:|:..:|.|:.||||.:.|::||.:|:..:    ..::....|::....|:|.|||:.|:
Mouse   255 VWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVAN 319

  Fly   304 MGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSHTAT 368
            ...::.:..|:...|.|.::|..|.:...|:||::|:|.|.:.......:||::.|.:..|.|..
Mouse   320 FCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTV 384

  Fly   369 RKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSI 433
            ||::| .|.:|....|:........|.:.::.|.:.||.:|...|||.:||||:.||:|..||.|
Mouse   385 RKIMN-CGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGI 448

  Fly   434 TNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGSGERQYWDNPED 498
            :|....|:|::.||..|.:..:.|:.   :||.||.|||.|:.....||.:|.|||:|.|.:||:
Mouse   449 SNGVGTLSGMVCPIIVGAMTKNKSRE---EWQYVFLIAALVHYGGVIFYALFASGEKQPWADPEE 510

  Fly   499 DEQK 502
            ..::
Mouse   511 TSEE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 162/465 (35%)
MFS 100..485 CDD:119392 138/390 (35%)
Slc17a6NP_543129.3 2A0114euk 70..511 CDD:129972 163/464 (35%)
MFS 75..498 CDD:119392 153/446 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838823
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100421
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.650

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