DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and slc17a6

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_004913390.1 Gene:slc17a6 / 101730310 XenbaseID:XB-GENE-1011394 Length:583 Species:Xenopus tropicalis


Alignment Length:489 Identity:167/489 - (34%)
Similarity:261/489 - (53%) Gaps:38/489 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ESLEQQPQRCFAT------RYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIKSGEAEEYDDE 85
            |..|::|..|..|      ||.:..|..||...::.:|.|:.||||.|||::.|..         
 Frog    51 EVAEKKPPLCDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMVNNSTIHH--------- 106

  Fly    86 CGDRDIPIDDSQDGEFAWSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFA 150
             |.:.|    .:..:|.|...:.|.|..|||:||::||||.|.:|.:..:.|..|..:::.|...
 Frog   107 -GGKII----KEKAKFNWDPEIVGMIHGSFFWGYIVTQIPGGYIASRLAANRVFGAAIVLTSTLN 166

  Fly   151 FLVPVAARGGGVWGLCA--VRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTII 213
            .|:|.|||   |...|.  ||.:|||.||...|..|.:.:||.||.||||:....:.|:..|.:|
 Frog   167 MLIPSAAR---VHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVI 228

  Fly   214 SMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGTD 278
            :|||:|:|.:|   .||.|:|||:|..|.||.:.:::..:|.|:.||||.:.|:.||.:|:..:.
 Frog   229 AMPLAGILVQY---TGWSSVFYVYGCFGLVWYLFWILVSYESPAKHPTITDEERNYIEESIGESA 290

  Fly   279 VVKSP----PIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLP 339
            .:..|    ..|::....|:|.|||:.|:...::.:..|:...|.|.::|..|.:...|:||::|
 Frog   291 NILGPVEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVP 355

  Fly   340 YLAMWLFSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIG 404
            :|.|.:.......:||::.|.:..|.|..||::| .|.:|....|:........:.:.::.|.:.
 Frog   356 HLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN-CGGFGMEATLLLVVGYSHSKGVAISFLVLA 419

  Fly   405 VGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFF 469
            ||.:|...|||.:||||:.||:|..||.|:|....|:|::.|:..|.:....|:.   :||.||.
 Frog   420 VGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKSRE---EWQYVFL 481

  Fly   470 IAAFVYIICGTFYNIFGSGERQYWDNPE--DDEQ 501
            |||.|:.....||.||.|||:|.|.:||  .||:
 Frog   482 IAALVHYGGVIFYGIFASGEKQPWADPEQTSDEK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 160/467 (34%)
MFS 100..485 CDD:119392 134/390 (34%)
slc17a6XP_004913390.1 MFS_SLC17A6_7_8_VGluT 74..498 CDD:340940 150/447 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.