DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and slc17a8

DIOPT Version :9

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_002936892.1 Gene:slc17a8 / 100489470 XenbaseID:XB-GENE-988965 Length:588 Species:Xenopus tropicalis


Alignment Length:556 Identity:188/556 - (33%)
Similarity:287/556 - (51%) Gaps:73/556 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLNHRHR--DGHVLVWNQRNLHE-SLE------------QQPQR--CFA----TRYFVTFMLFLG 50
            ||.:..|  ||       ||:.| ::|            |.|.|  |:.    .||.:..|..||
 Frog    28 SLGNLQRKIDG-------RNIEEDNIELDEDGRPVQAPTQPPPRFDCYCCGIPKRYIIAMMSGLG 85

  Fly    51 MANAYVMRTNMSVAIVAMV-NHTAIKSGEAEEYDDECGDRDIPIDDSQDGEFAWSSALQGYILSS 114
            ...::.:|.|:.||||.|| |:|....|:.|               .|..:|.|.....|.|..|
 Frog    86 FCISFGIRCNLGVAIVEMVNNNTVYVDGKPE---------------MQKAQFNWDPETVGLIHGS 135

  Fly   115 FFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLC--AVRFIQGLGEG 177
            ||:||:|||||.|.:|.|..:.|..|..:.:.|:...|:|.|||   |...|  :||.:|||.||
 Frog   136 FFWGYIITQIPGGFIANKLAANRVFGAAIFLTSILNMLIPSAAR---VHFGCVISVRVLQGLVEG 197

  Fly   178 PIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGT 242
            ...|..|.|.:||.||.||||:....:.|:..|.:|:|||:|:|.:|   .||||:||::|:.|.
 Frog   198 VTYPACHGMWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGVLVQY---IGWPSVFYIYGVFGM 259

  Fly   243 VWSIAFLIFVHEDPSSHPTIDEREKKYINDSLW-GTDVVKSPPI--PFKAIIKSLPFYAILFAHM 304
            .|.:.:|:...|.|::||:|...|:.||..|:. |:::|.:...  |:|....|:|.|||:.|:.
 Frog   260 CWYVFWLLHATESPAAHPSITFEERTYIETSIGEGSNLVTTGKFKTPWKKFFTSMPVYAIIVANF 324

  Fly   305 GHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSHTATR 369
            ..::.:..|:...|.|.::|..|.:...||||::|::.|.:.......:||::.|.|..|.|..|
 Frog   325 CRSWTFYLLLISQPAYFEEVFGFPISKVGLLSAVPHMVMTIIVPVGGQLADFLRSRKILSTTTVR 389

  Fly   370 KLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSIT 434
            |::| .|.:|....|:........:|::::.|.:.||.:|...|||.:||||:.||:|..||.|:
 Frog   390 KIMN-CGGFGMEATLLLVVGYSHTKAISISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGIS 453

  Fly   435 NCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTFYNIFGSGERQYWDNPED- 498
            |....|:|::.|:..|.:..:.::.   :||.||.|||.|:.....||.||.|||:|.|.:||. 
 Frog   454 NGVGTLSGMVCPLIVGAMTKNKTRE---EWQNVFLIAAIVHYSGVIFYGIFASGEKQEWADPESL 515

  Fly   499 --------DEQKPALQT-----TVTTSPARLSNGST 521
                    |..:.|.:|     :.|:|..:.|.|||
 Frog   516 SEDKCGIIDNDELAEETELNNESFTSSNKKSSYGST 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 166/474 (35%)
MFS 100..485 CDD:119392 139/389 (36%)
slc17a8XP_002936892.1 2A0114euk 75..513 CDD:129972 164/462 (35%)
MFS 81..502 CDD:119392 156/445 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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