DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Picot and slc17a6b

DIOPT Version :10

Sequence 1:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001122293.1 Gene:slc17a6b / 100149756 ZFINID:ZDB-GENE-030616-554 Length:584 Species:Danio rerio


Alignment Length:511 Identity:171/511 - (33%)
Similarity:267/511 - (52%) Gaps:50/511 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 CFA--TRYFVTFMLFLGMANAYVMRTNMSVAIVAMVNHTAIK-SGEAEEYDDECGDRDIPIDDSQ 97
            ||.  .||.:..|..||...::.:|.|:.||||:|||::.|. :|:              |...:
Zfish    63 CFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTIHLNGK--------------IIIKE 113

  Fly    98 DGEFAWSSALQGYILSSFFYGYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGV 162
            ..:|.|.....|.|..|||:||::||||.|.::.:..:.|..|..:|:.|.....:|.||||.  
Zfish   114 KAKFNWDPETVGLIHGSFFWGYIVTQIPGGYISSRLAANRVFGAAILLTSTLNMFIPSAARGH-- 176

  Fly   163 WGLCA--VRFIQGLGEGPIVPCTHAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYG 225
            :| |.  ||.:|||.||...|..|.:.:||.||.||||:....:.|:..|.:|:|||:|:|.:| 
Zfish   177 YG-CVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQY- 239

  Fly   226 FDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDEREKKYINDSLWGTDVVKSP----PIP 286
              .||.|:|||:|..|..|.:.:::..:|.|:.||||...|:.||.:|:..:..:..|    ..|
Zfish   240 --TGWSSVFYVYGCFGIFWYMFWILVSYESPAEHPTITAEERCYIEESIGESAKLLGPADKFKTP 302

  Fly   287 FKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFIS 351
            ::....|:|.|||:.|:...::.:..|:...|.|.::|..|.:...|:||:||:|.|.:......
Zfish   303 WRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSALPHLVMTIIVPIGG 367

  Fly   352 VVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFK 416
            .:||.:.|....|.|..||::| .|.:|....|:........:.:.::.|.:.||.:|...|||.
Zfish   368 QLADHLRSKNILSTTTVRKIMN-CGGFGMEATLLLIVGYSHSKGVAISFLVLAVGFSGFAISGFN 431

  Fly   417 INHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFFIAAFVYIICGTF 481
            :||||:.||:|..||.|:|....|:|::.|:..|.:....::.   :||.||.||:.|:.....|
Zfish   432 VNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTRE---EWQYVFLIASLVHYGGVIF 493

  Fly   482 YNIFGSGERQYWDNPE---------DDEQKPALQT-TVTTS------PARLSNGST 521
            |.||.|||:|.|.:||         .||.:.|.:| .:|.|      ||: |.|:|
Zfish   494 YGIFASGEKQPWADPELTSDEKCGFIDEDELAEETGDITQSYGALGAPAK-SYGAT 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 158/475 (33%)
slc17a6bNP_001122293.1 MFS_SLC17A6_7_8_VGluT 73..498 CDD:340940 148/448 (33%)

Return to query results.
Submit another query.