DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nach and Asic5

DIOPT Version :10

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_067345.1 Gene:Asic5 / 58170 MGIID:1929259 Length:495 Species:Mus musculus


Alignment Length:511 Identity:118/511 - (23%)
Similarity:210/511 - (41%) Gaps:116/511 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DFCATSSIHGLKYTRDEDTNKIVHLVWLLISVVMFICAVVMARTFYMDYRSSPTRMNVESDNTPV 93
            ||..::|.||: :...::.||:..::||.:.:......|....:..::|.:.||..::|...  |
Mouse    40 DFAMSTSFHGI-HNIAQNQNKVRKVIWLAVVLGSVSLLVWQIYSRLVNYFTWPTTTSIEVQY--V 101

  Fly    94 NRLYFPPVTICPDVLFNMQKSEAFLNTLRLPKGAELRGILRKLHIFYGFMLDDERYSAEDIEQME 158
            .::.||.||:|....|..:....|             ||:..|......:|..:..||.:....|
Mouse   102 EKIEFPAVTLCNLNRFQTEAVSRF-------------GIIFFLWDIVSKVLRLQEISANNTGSPE 153

  Fly   159 ALLFL---NNLTIPEFVEH--LRWNCDEILYRCRFNGEIMDCS-KIFQLSKTFFGHCCSFNLRQK 217
            .|.|:   .|.:|.|||::  ...|.|.::: |.|.|:  .|| |.|:...|.:|:|.:||..:.
Mouse   154 TLDFVTNHQNFSITEFVKNNGFYLNNDTLVH-CEFFGK--TCSPKDFKHVFTEYGNCFTFNYGEN 215

  Fly   218 GWVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGLSVVVRYKDDNYDPLQSYS-YGVKLLIQEA 281
              :.||            |.::.:.:    ||:..|.|......||  |:..:: .||..:|   
Mouse   216 --IQNK------------NKVSVSGR----GLKLLLDVHQEEFTDN--PVPGFADAGVIFVI--- 257

  Fly   282 DAFPSAHSAAKFIAFNSETFAAVRPQETFCSSAV---KALIIEERNCVFQNEFP---------MR 334
                  ||..|...|:.          ...||.|   ..:.|.:...|.| |:|         :|
Mouse   258 ------HSPKKEPQFDG----------LGLSSPVGMHARVTIRQLKTVHQ-EYPWGECNPNIKLR 305

  Fly   335 YFSDYVYPNCELNCRVTNMVKFCGCHTYFFDFNRTS-DRICTFRDIPCLVDNFGRLLLICSKYSD 398
            .|..|....|...|:..::.:.|||..:....|... |.:..:..:..::|:..|..| |:    
Mouse   306 NFITYSTYGCLKECKARHIQRLCGCLPFLLPGNGVECDLLEYYNCVSPILDHIERKGL-CT---- 365

  Fly   399 FNRLLSANIITRKKSTQCYCPLTCEHIDY--DVQLTNFPLELNMPVADKFYSGLAK--------- 452
                    :.|...|    ||::||..:|  .|..:.||.:.    |.:|   |||         
Mouse   366 --------MGTHNSS----CPVSCEETEYPATVSYSTFPSQR----ATRF---LAKKLNQSQEYI 411

  Fly   453 NDGVLHVFIN--SFSYRRLRRDLLSNMVTLVSNLGSAFSLFVGMSMLSVVEIIYYF 506
            .:.::::.||  ..:|:..::....::..|::::|....||.|.|:::::|||.||
Mouse   412 RENLVNIEINYSDLNYKITQQQKAVSVPELLADVGGQLGLFCGASLITIIEIIEYF 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 ASC 30..505 CDD:459966 115/507 (23%)
Asic5NP_067345.1 Binds the plasma membrane and stabilizes the channel in the closed state. /evidence=ECO:0000250|UniProtKB:Q9R0W5 1..30
ASC 41..466 CDD:459966 115/507 (23%)
GAS motif, ion selectivity filter. /evidence=ECO:0000250|UniProtKB:P78348 454..456 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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