DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nach and scnn1a

DIOPT Version :10

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001184124.1 Gene:scnn1a / 395013 XenbaseID:XB-GENE-996083 Length:633 Species:Xenopus tropicalis


Alignment Length:646 Identity:142/646 - (21%)
Similarity:237/646 - (36%) Gaps:198/646 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EELKPEQVDLKVTPFVGYLRRTWSDFCATSSIHGLKYTRDEDTNKIVHLVWLLISVVMFICAVVM 69
            :|:|.|:..|  ..|....|..:..||:.::|||........:|::....||::.:..|......
 Frog     3 KEVKNEKEPL--IEFFSSYRELFEFFCSNTTIHGAIRLVCSRSNRMKTAFWLVLFLATFGLMYWQ 65

  Fly    70 ARTFYMDYRSSPT--RMNVESDNTPVNRLYFPPVTICPDVLFNMQKSEAFLNTLR---------- 122
            ....:..|.|.|.  .:||.||..|     ||.||:|   ..|..:.:|..|.|:          
 Frog    66 FGLLFGQYFSYPVSINLNVNSDKLP-----FPAVTVC---TLNPYRYKAIQNDLQELDKETQRTL 122

  Fly   123 ----------------------------------LPKGA------------ELRGILRKLHIFYG 141
                                              :|.|:            ||:...|:.:|  |
 Frog   123 YELYKYNSTGVQGWIPTNQRVRRDRPGLPHLLELVPPGSKTHRVSRSVIEEELQVKRREWNI--G 185

  Fly   142 FMLDDE--------RYSA--EDIEQMEALLFLNNLT-IPEFVEHLRWNCDEILYRCRFNGEIMDC 195
            |.|.:|        .|::  :.|.:.....::|.|. :||.........:..::.||||.|....
 Frog   186 FKLCNETGGDCFYQTYTSGVDAIREWYRFHYINILARVPEEAAIDGEQLENFIFACRFNEESCTK 250

  Fly   196 SKIFQLSKTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGLSVVVRYK 260
            :.........:|:|.:||..:.|     .:||.|              .::.|::.||::::|.:
 Frog   251 ANYSHFHHAIYGNCYTFNQNRSG-----QSNLWS--------------SSMPGIKNGLTLILRTE 296

  Fly   261 DDNYDPLQSYSYGVKLLI--QEADAF---------PSAHSAAKFIAFNSETFAAVRPQETFCSSA 314
            ..:|.||.|...|.::|:  .:..||         |...::   |....||...:..:.:.||  
 Frog   297 QHDYIPLLSSVAGARVLVHGHKEPAFMDDSGFNIPPGMETS---IGMKKETVNRMGGKYSDCS-- 356

  Fly   315 VKALIIEERNCV-FQNEFPMRYFSDYVYPNCELNCRVTNMVKFCGCHTYFF---------DFNR- 368
                  |:.:.| .:|.|.    |:|....|..:|....||:.|||...|:         |:|: 
 Frog   357 ------EDGSDVDVKNLFE----SEYTEQVCVRSCFQAAMVERCGCGYAFYPLSPGDEFCDYNKH 411

  Fly   369 --------------TSDRICTFRDI--PCLVDNFGRLLLICSKYSDFNRLLSANIITRKKSTQCY 417
                          ||:::..|...  ||||..:    .:.:.||.:...:|.:.:....|.|  
 Frog   412 KSWGHCYYKLIIEFTSNKLGCFSKCRKPCLVSEY----QLTAGYSKWPNRVSQDWVFHTLSRQ-- 470

  Fly   418 CPLTCEHIDYDVQLTNFPLELNMPVADKFYSGLAKNDGVLHVFINSFSYRRLRRDLLSNMVTLVS 482
                     |::...|               |:||    |:::....:|:.::.....|||.|:|
 Frog   471 ---------YNLTDRN---------------GIAK----LNIYFEELNYKTIQESPTINMVMLLS 507

  Fly   483 NLGSAFSLFVGMSMLSVVE---------IIYYFSVILRKNYKL--ECETRSQMLHKKPKFA 532
            .|||.:||:.|.|:|||||         ||....:..|..||.  |.|..|.:....|.||
 Frog   508 LLGSQWSLWFGSSVLSVVEMLELVIDLVIIVLIMLFHRYYYKQADEGEATSAVPTPAPSFA 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 ASC 30..505 CDD:459966 127/590 (22%)
scnn1aNP_001184124.1 ENaC 18..602 CDD:273304 137/629 (22%)

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