DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nach and Scnn1a

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_113736.1 Gene:Scnn1a / 25122 RGDID:3639 Length:699 Species:Rattus norvegicus


Alignment Length:602 Identity:132/602 - (21%)
Similarity:219/602 - (36%) Gaps:177/602 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KPEQVDLKVTPFVGYLRRTWSDFCATSSIHGLKYTRDEDTNKIVHLVWLLISVVMFICAVVMA-- 70
            :|.:.:..:..|....|..:..||..::|||.........|::....|    .|:::|...|.  
  Rat    66 QPTEEEEALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNRMKTAFW----AVLWLCTFGMMYW 126

  Fly    71 --RTFYMDYRSSPTRMNVESDNTPVNRLYFPPVTIC---------------------PDVLFNMQ 112
              ...:.:|.|.|..:|:   |...::|.||.||:|                     ...||::.
  Rat   127 QFALLFEEYLSYPVSLNI---NLNSDKLVFPAVTVCTLNPYRYTEIKEELEELDRITEQTLFDLY 188

  Fly   113 KSE-------------------AF---LNTLRLP----KGAELRG-----------ILRKLHIFY 140
            |..                   ||   |..||.|    .|...|.           :.|| ....
  Rat   189 KYNSSYTRQAGARRRSSRDLLGAFPHPLQRLRTPPPPYSGRTARSGSSSVRDNNPQVDRK-DWKI 252

  Fly   141 GFMLDDER--------YSA--EDIEQMEALLFLNNL-----TIPEFVEHLRWNCDEILYRCRFNG 190
            ||.|.::.        ||:  :.:.:.....::|.|     |.|...|....|   .::.||||.
  Rat   253 GFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLSDTSPALEEEALGN---FIFTCRFNQ 314

  Fly   191 EIMDCSKIFQLSKTFFGHCCSFNLRQKG--WVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGL 253
            ...:.:...:.....:|:|.:||.:...  |::                       ::.|:..||
  Rat   315 APCNQANYSKFHHPMYGNCYTFNDKNNSNLWMS-----------------------SMPGVNNGL 356

  Fly   254 SVVVRYKDDNYDPLQSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRP-QETFCSSAVKA 317
            |:.:|.:.:::.||.|...|.::::...|. |         ||..:....:|| .||..|...:|
  Rat   357 SLTLRTEQNDFIPLLSTVTGARVMVHGQDE-P---------AFMDDGGFNLRPGVETSISMRKEA 411

  Fly   318 LIIEERN---CVFQ-NEFPMR--YFSDYVYPNCELNCRVTNMVKFCGCHTYFFDFNRTSDRICTF 376
            |.....|   |... ::.|::  |.|.|....|..:|...||:|.||| .|.|.........|.:
  Rat   412 LDSLGGNYGDCTENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGC-AYIFYPKPKGVEFCDY 475

  Fly   377 RDIPCLVDNFGRLLLICSKYSD----FNRLLSANIITRKKSTQCY--CPLTCEHIDYDVQ--LTN 433
            |                 |.|.    :.:|..|..:   .|..|:  |...|..|:|.:.  .:.
  Rat   476 R-----------------KQSSWGYCYYKLQGAFSL---DSLGCFSKCRKPCSVINYKLSAGYSR 520

  Fly   434 FP-------------LELNMPVADKFYSGLAKNDGVLHVFINSFSYRRLRRDLLSNMVTLVSNLG 485
            :|             |:.|..:.:| .:|:||    |::|....:|:.........||:|:||||
  Rat   521 WPSVKSQDWIFEMLSLQNNYTINNK-RNGVAK----LNIFFKELNYKTNSESPSVTMVSLLSNLG 580

  Fly   486 SAFSLFVGMSMLSVVEI 502
            |.:||:.|.|:|||||:
  Rat   581 SQWSLWFGSSVLSVVEM 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
Scnn1aNP_113736.1 ENaC 80..677 CDD:273304 130/588 (22%)
deg-1 88..600 CDD:273309 129/580 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345630
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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