DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nach and Scnn1g

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_035456.1 Gene:Scnn1g / 20278 MGIID:104695 Length:655 Species:Mus musculus


Alignment Length:658 Identity:134/658 - (20%)
Similarity:247/658 - (37%) Gaps:190/658 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EQVDLKV---TPFVGYLRRTWSD----FCATSSIHGLK---YTRDEDTNKIVHLVWL-----LIS 59
            |::..|:   .|..|....|..|    :|..::.||.:   .:|    .::..|:|:     .::
Mouse     5 EKIKAKIKKNLPVRGPQAPTIKDLMHWYCLNTNTHGCRRIVVSR----GRLRRLLWIAFTLTAVA 65

  Fly    60 VVMFICAVVMARTFYMDYRSSPTRMNVESDNTPVNRLYFPPVTIC----------PDVLFNM--- 111
            ::::.||:::. :||        .::| |......:|.||.||||          .|:|.::   
Mouse    66 LIIWQCALLVF-SFY--------TVSV-SIKVHFQKLDFPAVTICNINPYKYSAVSDLLTDLDSE 120

  Fly   112 --------------------QKSEA-------------FLNTLRL------PKG----------A 127
                                ::.||             |||.:.|      .||          .
Mouse   121 TKQALLSLYGVKDVLDSTPRKRREAGSMRSTWEGTPPRFLNLIPLLVFNENEKGKARDFFTGRKR 185

  Fly   128 ELRG-ILRK----LHI-----FYGFML------DDERYSAED----IEQMEALLFLNNLT-IP-E 170
            ::.| |:.|    :|:     ..||.|      |...|:...    |::...|.::|.:. :| |
Mouse   186 KISGKIIHKASNVMHVHESKKLVGFQLCSNDTSDCATYTFSSGINAIQEWYKLHYMNIMAQVPLE 250

  Fly   171 FVEHLRWNCDEILYRCRFNGEIMDCSKIFQLSKTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHL 235
            ...::.::.:|:|..|.|:|...|...........:|:|.:||.|:...:               
Mouse   251 KKINMSYSAEELLVTCFFDGMSCDARNFTLFHHPMYGNCYTFNNRENATI--------------- 300

  Fly   236 NSLNFTAQRAIGGLRYGLSVVVRYKDDNYDPLQSYSYGVKLLIQEADAFPSAHSAAKFIAFNSET 300
                  ...::||..|||.|::...:|.|:|....|.|.|:|:.:.:.:|........|.....|
Mouse   301 ------LSTSMGGSEYGLQVILYINEDEYNPFLVSSTGAKVLVHQQNEYPFIEDVGTEIETAMST 359

  Fly   301 FAAVRPQETFCSSAVKALIIEERNCVFQNEFPMR--YFSDYVYPNCELNCRVTNMVKFCGCHTYF 363
            ...:...|:|..|...:...|:     .::.|:.  |.:.|....|..:|..|.||:.|||..|.
Mouse   360 SIGMHLTESFKLSEPYSQCTED-----GSDVPVTNIYNAAYSLQICLYSCFQTKMVEKCGCAQYS 419

  Fly   364 FDFNRTSDRICTFRDIPCLVDNFGRLLLICSKYSDFNRLLSANIITRKKSTQCYCPLTCEHIDYD 428
            ......:: .|.::..|    |:    :.|     :.:|..| .:..:...|..|..:|...::.
Mouse   420 QPLPPAAN-YCNYQQHP----NW----MYC-----YYQLYQA-FVREELGCQSVCKQSCSFKEWT 469

  Fly   429 V--QLTNFPLE------LNMPVAD---KFYSGLAKND-GVLHVFINSFSYRRLRRDLLSNMVTLV 481
            :  .|..:|.|      ||:...|   :....|.|.| ..|.:|....:.|.:.....:::..|:
Mouse   470 LTTSLAQWPSEASEKWLLNVLTWDQSQQINKKLNKTDLAKLLIFYKDLNQRSIMESPANSIEMLL 534

  Fly   482 SNLGSAFSLFVGMSMLSVVEIIY-----YFSVILRKNYKLECETRSQMLHKKPKFAW-----PKA 536
            ||.|....|::..|::.|:|||.     :||:|.|:.:            :|.|..|     |.:
Mouse   535 SNFGGQLGLWMSCSVVCVIEIIEVFFIDFFSIIARRQW------------QKAKDWWARRRTPPS 587

  Fly   537 NDTHSKEQ 544
            .:|.|.:|
Mouse   588 TETPSSQQ 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
Scnn1gNP_035456.1 ENaC 24..636 CDD:273304 130/639 (20%)
deg-1 32..557 CDD:273309 116/579 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 582..636 4/14 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842196
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I5144
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8693
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4675
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.830

Return to query results.
Submit another query.