DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nach and Scnn1a

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_035454.2 Gene:Scnn1a / 20276 MGIID:101782 Length:700 Species:Mus musculus


Alignment Length:647 Identity:137/647 - (21%)
Similarity:224/647 - (34%) Gaps:206/647 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EELKPEQVDLKVTPFVGYLRRTWSDFCATSSIHGLKYTRDEDTNKIVHLVWLLISVVMFICAVVM 69
            |..:|.:.:..:..|....|..:..||..::|||.........|::....|    .|:::|...|
Mouse    63 EPRQPTEEEEALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNRMKTAFW----AVLWLCTFGM 123

  Fly    70 A----RTFYMDYRSSPTRMNVESDNTPVNRLYFPPVTIC---------------------PDVLF 109
            .    ...:.:|.|.|..:|:   |...::|.||.||:|                     ...||
Mouse   124 MYWQFALLFEEYFSYPVSLNI---NLNSDKLVFPAVTVCTLNPYRYTEIKEDLEELDRITEQTLF 185

  Fly   110 NMQKSEAFLNTL---RLPKGAELRGIL-------------------------------------- 133
            ::.|..:.....   |.....:|||.|                                      
Mouse   186 DLYKYNSSYTRQAGGRRRSTRDLRGALPHPLQRLRTPPPPNPARSARSASSSVRDNNPQVDRKDW 250

  Fly   134 ---------RKLHIFYGFMLDDERYSA--EDIEQMEALLFLNNL-----TIPEFVEHLRWNCDEI 182
                     .|...||      :.||:  :.:.:.....::|.|     |.|...|..   ....
Mouse   251 KIGFQLCNQNKSDCFY------QTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEA---LGSF 306

  Fly   183 LYRCRFNGEIMDCSKIFQLSKTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHLNSLNFTAQRAIG 247
            ::.||||....:.:...|.....:|:|.:||       |...:||              ...::.
Mouse   307 IFTCRFNQAPCNQANYSQFHHPMYGNCYTFN-------NKNNSNL--------------WMSSMP 350

  Fly   248 GLRYGLSVVVRYKDDNYDPLQSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRP-QETFC 311
            |:..|||:.:|.:.:::.||.|...|.::::...|. |         ||..:....||| .||..
Mouse   351 GVNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDE-P---------AFMDDGGFNVRPGVETSI 405

  Fly   312 SSAVKALIIEERN---CVFQ-NEFPMR--YFSDYVYPNCELNCRVTNMVKFCGCHTYFF------ 364
            |...:||.....|   |... ::.|::  |.|.|....|..:|...||:|.|||...|:      
Mouse   406 SMRKEALDSLGGNYGDCTENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYPKPKGV 470

  Fly   365 ---DFNRTS---------------DRICTFRDI--PCLVDNFGRLLLICSKYSDFNRLLSANIIT 409
               |:.:.|               |.:..|...  ||.|.|:    .:.:.||.:..:.|.:.|.
Mouse   471 EFCDYLKQSSWGYCYYKLQAAFSLDSLGCFSKCRKPCSVTNY----KLSAGYSRWPSVKSQDWIF 531

  Fly   410 RKKSTQCYCPLTCEHIDYDVQLTNFPLELNMPVADKFYSGLAKNDGVLHVFINSFSYRRLRRDLL 474
            ...|                      |:.|..:.:| .:|:||    |::|....:|:.......
Mouse   532 EMLS----------------------LQNNYTINNK-RNGVAK----LNIFFKELNYKTNSESPS 569

  Fly   475 SNMVTLVSNLGSAFSLFVGMSMLSVV---EIIYYFSVILRKNYKLECETRSQMLHKKPKFAW 533
            ..||:|:|||||.:||:.|.|:||||   |:|:...||          |...:||:.....|
Mouse   570 VTMVSLLSNLGSQWSLWFGSSVLSVVEMAELIFDLLVI----------TLIMLLHRFRSRYW 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
Scnn1aNP_035454.2 ENaC 80..677 CDD:273304 134/630 (21%)
deg-1 88..600 CDD:273309 125/589 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842200
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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