DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nach and acd-4

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_505230.1 Gene:acd-4 / 185036 WormBaseID:WBGene00017879 Length:613 Species:Caenorhabditis elegans


Alignment Length:589 Identity:124/589 - (21%)
Similarity:225/589 - (38%) Gaps:132/589 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LKVTPFVGYLRRTWSDFCATSSIHG---LKYTRDEDTNKIVHLVWLL--ISVVMFIC--AVVMAR 71
            |:.|..||.:.:....|...::::|   :.|.:     :...:.|:|  ||::.|:.  .|::.:
 Worm    23 LRKTEGVGSVYQETQHFSTITTVNGPRRIFYGK-----RSAQIFWILVVISILAFLVYQIVILIQ 82

  Fly    72 TFYMDYRSSPTRMNVESDNTPVNR--LYFPPVTIC---PDVLFNMQK-------SEAFLNTLRLP 124
            .||    |.||...:   |...|.  :|||.||:|   |.....::|       ||..||.|...
 Worm    83 YFY----SKPTLSQI---NFITNEGAVYFPSVTVCNLNPVKTSFIKKLNSSGDLSEELLNYLLAT 140

  Fly   125 KGAELRGILRKLHIFYGFMLDDERYSAEDIEQMEALLFLNN---LTIPEFVEHLRWNCDEILYRC 186
            |...:            :|.::..........:.||::|.|   ..|..|:...:::|||:...|
 Worm   141 KTNSM------------YMFNNANIFELKRAHLNALVYLANHPDFEIVNFLNSAQFDCDELFETC 193

  Fly   187 RFNGEIMDCSKIFQLSKTFFGHCCSFNLRQK--GWVNNKLNNLESFKVFHLNSLNFTAQRAIGGL 249
            .:.|:..:|.|....|.|..|.|...|||.:  .|:..|..:..|.|.                 
 Worm   194 FYGGKQFNCCKYMTQSITSLGRCWELNLRNETDAWLTKKGRSGTSPKT----------------- 241

  Fly   250 RYGLSVVVRYKDD------NYDPLQSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRPQE 308
              ||.::...:..      :|...|  ..|.:..|......|..  ||:.|        .|.|..
 Worm   242 --GLQIIANARQSEQFINFHYSSFQ--ENGFRYFIHPPHVSPDL--AAEGI--------TVSPSR 292

  Fly   309 TFCSSAVKA----LIIEER--NCVFQNEFPMRYFSDYVYPN--CELNCRVTNMVKFCGCHTYFFD 365
            . .:||:|.    |:..|.  ||.  :.:|..|.::..|.:  |:..|......|.|||..|.::
 Worm   293 V-VNSAIKTVLHDLLNHENWGNCT--SSWPEHYNTNLPYSSSACQALCVSNYFKKLCGCSPYSYN 354

  Fly   366 FNRTSDRICTFRDIPCLVDNFGRLLLICSKYSDFNRLLSANIITRKKSTQC-YCPLTCEHIDYDV 429
            .:..:.....:.::.|:::...:        ||.|..:|.:.      ..| .|.|.|:...|. 
 Worm   355 IDNNTQVCLPYEEVICMMEKMTK--------SDSNGTVSLDF------PFCAECHLACQKTSYS- 404

  Fly   430 QLTNFPLELN-------MPVADKFYSGLAKNDGVLHV-FINSF--SYRRLRRDLLSNMVTLVSNL 484
            ..|::....|       ....::..|.:.:|..:::: |:..|  ||.:::...:.|....:..|
 Worm   405 SYTSYGDGFNYNSMKWLTRETNRSASYIRQNIAIINIHFMELFYTSYSQVKATTILNTFNKIFGL 469

  Fly   485 GSAFSLFVGMSMLSVVEIIYYFSVI-------LRKNYKLECETRSQMLHKKPKFAWPKANDTHSK 542
            .   .|:.|||::|:.|:|.||:.|       .|:.|..|.:...:...:..:.|..:|..:.|:
 Worm   470 N---GLWFGMSVVSLTELILYFTKISWIAVSSKRRQYLFEKKMSEKRKERNIEEAVQEAEISRSR 531

  Fly   543 EQKS 546
            ...:
 Worm   532 RSSA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
acd-4NP_505230.1 ASC 39..487 CDD:279230 111/523 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162286
Domainoid 1 1.000 94 1.000 Domainoid score I4697
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.850

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