DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nach and delm-1

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_501590.2 Gene:delm-1 / 184882 WormBaseID:WBGene00009073 Length:626 Species:Caenorhabditis elegans


Alignment Length:564 Identity:113/564 - (20%)
Similarity:204/564 - (36%) Gaps:134/564 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LRRTWSDFCATSSIHGLK--------YTRDEDTNKIVHLVWLL-----ISVVMFICAVVMARTFY 74
            ::|....||.|:::||.|        :|:         |.||:     :.::::.|.::.|    
 Worm    66 VKRETQHFCETTTMHGPKRIFKGKRIFTK---------LFWLIMVLGSLGLLIYQCWILSA---- 117

  Fly    75 MDYRSSPTRMNVESDNTPVNRLYFPPVTICPDVLFNMQKSEAFLNTLRLPKGA--ELRGILRKLH 137
             .|.|.|....| |...|.:.:.||.||:|..........||...|..:....  .|.....::.
 Worm   118 -SYLSKPIVSQV-SFLIPEDGMEFPSVTVCNFTPIRKSYIEAMNRTGDVSPDMINYLMNWFTEIP 180

  Fly   138 IFYGFMLDDERYSAEDIEQMEALLFLNNLTIPEFVEHLRWNCDEILYRCRFNGEIMDCSKIFQLS 202
            |..| ..|.:..:..:.|..|......|.|:.:|.....::|.:::..|.|.||..||..:...:
 Worm   181 ILLG-NTDQQSLNKGNEELREYQSIHPNFTVDQFFMDASFDCSDLMKLCSFQGESFDCCSLASPT 244

  Fly   203 KTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGLSVVVRYK-DDNYDP 266
            .|..|.|.:.:| .|..:|.:..                     .|:|.|||:.:... |:.:|.
 Worm   245 LTPVGKCFTLDL-SKSPMNKQTE---------------------PGIRAGLSLTLDANLDEQFDS 287

  Fly   267 L--------QSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRPQETFCSSAVKALIIEER 323
            .        .|:..|.:..:...|..|:..|....::.||..::|:        |..:.:::...
 Worm   288 STGIDALLPNSFVNGFRYFVHPKDTIPNLASDEYTVSPNSVAYSAI--------SKFRYVLLPPN 344

  Fly   324 ---NCVFQNEFPMRYFSDYVYPNCELNCRVTNMVKFCGCHTYFFDFNRTSDRICTFRDIPCLVDN 385
               ||.....:.::....|...||...|:....:..|||                   .|.|. |
 Worm   345 DWGNCTEDYPYGIQSNLSYTSGNCLSLCKAKYFMNQCGC-------------------TPALY-N 389

  Fly   386 FGRLLLICSKYSDF----NRLLSANIITRKKSTQ---C-YCPLTCEHIDYDVQLTNFPLELNMPV 442
            .|.....|:.:..:    |.|...|..|.|...|   | .|...|:...|....:|         
 Worm   390 IGNNFQECTPFETYNCVNNSLSLLNEETGKMEFQPPSCTRCGQQCDSQVYRADNSN--------- 445

  Fly   443 ADKFYSG----------------LAKNDGVLHVFINSFSYRRLRRDLLSNMVTLVSNLGSAFSLF 491
            .::|.:|                :..|..::.:|....||....:...:::..|:|.:|....:|
 Worm   446 GNQFSAGAFNYFNSKNSSWSVDYMKSNFQMIRIFYRDMSYTEYNQVQDASITDLLSAIGGNMGMF 510

  Fly   492 VGMSMLSVVEIIYYFSVIL-------RKNYKLECETRSQMLHKK 528
            :|.|::::||:..:||.:.       |:|| |..:..::..|||
 Worm   511 LGGSVITIVELFLFFSKVFWIGFSKTRRNY-LYSKRANEKAHKK 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
delm-1NP_501590.2 ASC 73..524 CDD:279230 103/525 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162298
Domainoid 1 1.000 94 1.000 Domainoid score I4697
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.850

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