DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nach and delm-2

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_491296.1 Gene:delm-2 / 182851 WormBaseID:WBGene00016063 Length:608 Species:Caenorhabditis elegans


Alignment Length:575 Identity:125/575 - (21%)
Similarity:220/575 - (38%) Gaps:139/575 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LRRTWSDFCATSSIHGLKYTRDEDTNKIVHLVWLLI---SVVMFICAVVMARTFYMDYRSSPTRM 84
            :.|....||.|:::||.|  |.....:...|.||::   |:.:.|..|.:..:   :|.|.|   
 Worm    61 VERETQHFCETTTMHGPK--RIFQGKRWATLFWLIMVCTSIGLLITQVCILAS---NYLSKP--- 117

  Fly    85 NVESD-NTPVNR--LYFPPVTICPDVLFNMQK-SEAFLNTLRLPKGAELRGILRKLHIF--YGFM 143
             |.|| :..:|.  :.||.:|||     |... .:.|:|.:..........|...:|.|  ...:
 Worm   118 -VVSDVSFLINEEGIQFPQITIC-----NFTPIRKTFVNEMNKTGQISPNMINYIMHWFTEVPIL 176

  Fly   144 LDDERYSA-----EDIEQMEALLFLN--NLTIPEFVEHLRWNCDEILYRCRFNGEIMDCSKIFQL 201
            :....:..     :|:::.:.    |  |.|:..|.....::|.:|...|.|.||..||..|...
 Worm   177 IGSSNWQLLHEGNKDLQEYQK----NNPNFTVQGFFIDAGFSCSDIFKLCSFQGETFDCCSISTP 237

  Fly   202 SKTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGLSVVV-RYKDDNYD 265
            ..|..|.|.:.:|            |.|.|    .|::   ::...|::.||::.: .:.::.:|
 Worm   238 VLTPLGKCYTLDL------------LSSTK----PSMH---KQTEPGIQAGLAITLDAHLEEQFD 283

  Fly   266 P--------LQSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRPQETFCSSAVKALIIEE 322
            .        ..|:..|.:..:...:..|...|....:..||..:.|:       ||....|:...
 Worm   284 GSNGMDALFTNSFVNGFQYFVHPPNTIPHLSSDEFTVTPNSVAYTAI-------SSERFELLPTN 341

  Fly   323 R--NCVFQNEFPMRYFSD--YVYPNCELNCRVTNMVKFCGCHTYFFDFNRTSDRICTFRDIPCLV 383
            :  ||.  ..:|....||  |:..||...|:....::.|||....::..|.......|..:.|:.
 Worm   342 KWGNCT--EHYPSGIKSDLPYLTGNCVSLCKAKFFMENCGCTPAVYNNERNLKECTPFETLACVN 404

  Fly   384 DNFGRLLLICSKYSDFNRLLSANIITRK---KSTQC-YCPLTCEHIDYDVQLTNFPLELNMPVAD 444
            ::.|                 :|..|.|   |..:| .|...|.::.|..    |..:.|...|.
 Worm   405 NHNG-----------------SNNATGKLEFKLPRCAQCAQQCNNLIYRA----FNSQGNQFSAR 448

  Fly   445 KF-----------YSGLAKNDGVLHVFINSFS---YRRLRRDLLSNMVTLVSNLGSAFSLFVGMS 495
            .|           .:.:..|..::|:|....|   |.:::...:|:   |:||:|....:|:|||
 Worm   449 AFEWFRTNNSNWTMAHIKTNFQIIHIFYQDMSNTEYNQVQDASISD---LLSNIGGNMGMFLGMS 510

  Fly   496 MLSVVEIIYYFSVIL-------RKNYKLECETRSQMLHKKPKFAWPKANDTHSKE 543
            ::::.||..|||.|:       |:.|..     |:.:|:|          ||.||
 Worm   511 LITITEICLYFSKIIWLGISKKRREYMY-----SKRVHEK----------THKKE 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
delm-2NP_491296.1 ASC 68..520 CDD:279230 111/521 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162299
Domainoid 1 1.000 94 1.000 Domainoid score I4697
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.850

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