DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nach and flr-1

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_510243.1 Gene:flr-1 / 181468 WormBaseID:WBGene00001465 Length:638 Species:Caenorhabditis elegans


Alignment Length:589 Identity:126/589 - (21%)
Similarity:225/589 - (38%) Gaps:173/589 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QEELKPEQVDLKVTPFVGYLRRTWSDFCATSSIHGLKYTRDEDT--NKIVHLVWLLISVVMFICA 66
            :.|.:.|::.|::..:      ...:|...::.|||....:.:|  ::|   .|::  ||:...:
 Worm     2 ETETESERIYLQLYDY------ETKEFSGLTTYHGLVRIYNSNTWPSRI---FWVV--VVLSCLS 55

  Fly    67 VVMARTFY--MDYRSSPTRMNVESDNT--PVNRLYFPPVTICPDVLFNMQKSEAFLNTLRLPKGA 127
            :.|..:.|  :.|.:.||....   ||  |:|.|.||.||||.            ||.|...|..
 Worm    56 LFMIHSGYLLLGYHAKPTLFQT---NTIVPMNGLLFPEVTICN------------LNPLNTTKLE 105

  Fly   128 ELRGILRKLHIFYGFMLDDE----RYSAEDIEQMEALLFLNN--------LTIPEFVEHLRWNCD 180
            ||.  :.|....|.|...||    .:.:..:.:.:.|..:||        ..:..|::.:..:|:
 Worm   106 ELN--ISKSTWTYIFGYFDEITTSEHKSTKLGEEQFLEIMNNYQELTKQEFNVKNFLKSVSKSCE 168

  Fly   181 EILYRCRFNGE-IMDCSKIFQLSKTFFGHCCSF-NLRQK----------GW--VNNKLNNLESFK 231
            |....|.|..| :.:|.:......|..|.|... |:.:|          ||  |.|..|.::.  
 Worm   169 ETFISCSFGREKLHNCCEHVTTEMTEVGVCFRLSNVNKKYRQWYSGNGFGWEFVLNGNNEIDD-- 231

  Fly   232 VFHLNSLNFTAQRAIGGLRYGLSVVVRYKDDNYDPLQSYSYGVKLLIQEADAFPSAHSAAKFIAF 296
              |.:||:|...|                            |..:::.|::.:|..:|....::.
 Worm   232 --HADSLDFEPDR----------------------------GFLIMVHESEKYPKINSYGVAVSP 266

  Fly   297 NSETFAAVRPQETFCSSAVKALIIEERNCVFQNEFPMRYFSD--YVYPNCELNCRVTNMVKFCGC 359
            :|:..||:        |.....::::.|....::...|..:|  |...:||::|::..:...|||
 Worm   267 DSQLHAAI--------SMKNISLLDKANWGSCSKGWNRNDTDVPYTATHCEIDCKLRKVRNLCGC 323

  Fly   360 H--TYFFDFNRTSDRICT-------FRDIPCLVDNFGRLLLICSKYSDFNRLLSANIITRKKSTQ 415
            .  .|....:.::|.|||       ||.:..| ||         ::.|                :
 Worm   324 SPLAYSARESGSNDTICTPYQIQQCFRKVRGL-DN---------RWED----------------E 362

  Fly   416 CYCPLTCEHIDYDVQLTNFPLELNMPVADKFYSGLAKN---DGVLHV--FINSFSYRRLRRDLLS 475
            |.||..|..:::||  ||...:|     |....||:.:   ..:.||  :.:..:|.|:.:....
 Worm   363 CDCPSECNMLEFDV--TNSYSDL-----DGRSRGLSSSKVESDISHVSLYFSHVAYERIEQQKQL 420

  Fly   476 NMVTLVSNLGSAFSLFVGMSMLSVVEI-IYYFSVILRKNYKLECETRSQMLHKKPKFAWPKANDT 539
            ....|:||:..:..||:|||.::::|| ||.|                       |..|...|.|
 Worm   421 QTADLLSNIAGSMGLFLGMSTVTLLEIFIYLF-----------------------KSVWGTVNST 462

  Fly   540 HSKE 543
            ..::
 Worm   463 RQQQ 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
flr-1NP_510243.1 ASC 22..450 CDD:279230 116/522 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7232
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.870

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