DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nach and Asic3

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006535700.1 Gene:Asic3 / 171209 MGIID:2159339 Length:563 Species:Mus musculus


Alignment Length:557 Identity:113/557 - (20%)
Similarity:206/557 - (36%) Gaps:140/557 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RRTWSD---FCATSSIHGLKYTRDEDTNKIVHLVW---LLISVVMFICAVVMARTFYMDYRSSPT 82
            ||..||   |..:.::|||.:........:...:|   :|:|:..|:..|.....:|.::....|
Mouse    12 RRQASDIRVFANSCTMHGLGHIFGPGGLTLRRGLWATAVLLSLAAFLYQVAERVRYYGEFHHKTT 76

  Fly    83 RMNVESDNTPVNRLYFPPVTICPDVLFNMQKSEAFLNTLRLPKGAELRGILRKLHIFY------- 140
            ....||     ::|.||.||:|.  :..:::|....|.|.. .|..|.|:....|..|       
Mouse    77 LDERES-----HQLTFPAVTLCN--INPLRRSRLTPNDLHW-AGTALLGLDPAEHAAYLRALGQP 133

  Fly   141 ----GFMLDDERYSAEDIEQMEALLFLNNLTIPEFVEHLRWNCDEILYRCRFNGEIMDCS-KIFQ 200
                |||..    ...|:.|:.|              ....:.:::|..||:.|:  .|. :.|.
Mouse   134 PAPPGFMPS----PTFDMAQLYA--------------RAGHSLEDMLLDCRYRGQ--PCGPENFT 178

  Fly   201 LSKTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGLSVVVRYKDDNYD 265
            :..|..|.|.:||...:|                 ..|..|.:   ||...||.:::..:.:.|.
Mouse   179 VIFTRMGQCYTFNSGAQG-----------------AELLTTPK---GGAGNGLEIMLDVQQEEYL 223

  Fly   266 PL------QSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRPQE-TF-------CSSAVK 316
            |:      ..:..|:::.|...:..|:........|...:||.:.:.|: :|       |::|  
Mouse   224 PIWKDMEETPFEVGIRVQIHGQEEPPAIDQLGFGAAPGHQTFVSCQQQQLSFLPPPWGDCNTA-- 286

  Fly   317 ALIIEERNCVFQNEF------PMRYFSD---YVYPNCELNCRVTNMVKFCGCHTYFFDFNRTSDR 372
                     ....:|      |:...|.   |....|.|.|....:.:.|||.......|   ..
Mouse   287 ---------SVDPDFDPEPSDPLGSPSSSPPYSLIGCRLACESRYVARKCGCRMMHMPGN---SP 339

  Fly   373 ICT---FRDI--PCL---------------VDN--FGRLLLICSKYSDFNRLLSANIITRKKSTQ 415
            :|:   ::|.  |.|               :|:  .|::||       |..|..|:.:.||.:  
Mouse   340 VCSPQQYKDCASPALGKAHLFSLPVPIHSDIDHNPLGQVLL-------FLALRPADAMLRKDT-- 395

  Fly   416 CYCPLTCEHIDY--DVQLTNFPLELNMPVADKFYSG----LAKNDGVLHVFINSFSYRRLRRDLL 474
            |.||..|....|  ::.:...|...:.....:.|:.    :.:|..||.:|..:.:|..:.:...
Mouse   396 CVCPNPCATTRYAKELSMVRIPSRASARYLARKYNRSETYITENVLVLDIFFEALNYEAVEQKAA 460

  Fly   475 SNMVTLVSNLGSAFSLFVGMSMLSVVEIIYYFSVILR 511
            ..:..|:.::|....||:|.|:|:::||:.|...:.:
Mouse   461 YEVSELLGDIGGQMGLFIGASLLTILEILDYLCEVFQ 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
Asic3XP_006535700.1 ASC 21..546 CDD:383197 109/548 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842194
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8693
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4675
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.880

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