DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nach and asic2

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_004918663.1 Gene:asic2 / 100492214 XenbaseID:XB-GENE-6033380 Length:541 Species:Xenopus tropicalis


Alignment Length:527 Identity:109/527 - (20%)
Similarity:190/527 - (36%) Gaps:137/527 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IHGLKYTRDEDTNKIVHLVWLLISVVMFICAVVMARTFYMDYRS----------SPTRMNVESDN 90
            :|||||.............|.|        |...:..|::.:.|          |.||:.:|.. 
 Frog    50 LHGLKYICSPKLAFRHRTFWFL--------AFFTSLGFFLSWSSNRLLYWLSFPSHTRVQLEWS- 105

  Fly    91 TPVNRLYFPPVTIC---PDVLFNMQKSE----------AFLNTLRLPKGAELRGILRKLHIFYGF 142
               ..|.||.||.|   |.....:.||:          .|.|....|..|||             
 Frog   106 ---KELAFPAVTFCNNNPVRFHRLSKSDLYFAGYWLGLLFANRTARPMLAEL------------- 154

  Fly   143 MLDDERYSAEDIEQMEALLFL-----NNLTIPEFVEHLRWNCDEILYRCRFNGEIM---DCSKIF 199
            :.:|.|...:.:....  |||     :.::: .|::.|....:::|..|::.||..   :.|.:|
 Frog   155 LPEDRRKWFQKLADFR--LFLPPRNFDGISV-GFMDRLGHQLEDMLLSCKYRGEACGPHNFSTVF 216

  Fly   200 QLSKTFFGHCCSFNLRQKGWVNNKLNNLESFKVFHLNSLNFTAQRAI-----GGLRYGLSVVVRY 259
                |.:|.|..||..|.|                         |.:     ||...||.:::..
 Frog   217 ----TRYGKCYMFNSGQDG-------------------------RPVLTTVKGGAGNGLEIMLDI 252

  Fly   260 KDDNYDPL------QSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRPQE-TFCSSAVKA 317
            :.|.|.|:      .::..|||:.|......|........:|...:||.|.:.|. |:..|...|
 Frog   253 QQDEYLPIWGDTEETTFEAGVKVQIHSQSEPPFIQELGFGVAPGFQTFVATQEQRLTYLPSPWGA 317

  Fly   318 LIIEERNCVFQNEFPMRYFSDYVYPNCELNCRVTNMVKFCGCHTYFFDFNRTSDRICTFRDIP-C 381
                   |.| :|....:|..|....|.::|....:|:.|||......           .|.| |
 Frog   318 -------CRF-SELGSDFFPVYSISACRIDCETRYIVENCGCKMVHMP-----------GDAPFC 363

  Fly   382 LVDNFGRLLLICSKYSDFNRLLSANIITRKKSTQCYCPLTCEHIDYDVQLT--NFPLELNMPVAD 444
            ..:.:..    |::       .:.:::..|....|.|.:.|....|:.:|:  ..|.:.:....:
 Frog   364 TPEQYKE----CAE-------PALDLLAEKDGGNCVCTIPCNVTRYNKELSMVKIPSKTSAKYLE 417

  Fly   445 KFYSGLAK----NDGVLHVFINSFSYRRLRRDLLSNMVTLVSNLGSAFSLFVGMSMLSVVEIIYY 505
            |.::...|    |..||.||..:.:|..:.:.....:..|:.::|....||:|.|:|:::|:..|
 Frog   418 KKFNKSEKYILDNILVLDVFFEALNYETIEQRKAYEVAGLLGDIGGQMGLFIGASILTILELFDY 482

  Fly   506 FSVILRK 512
            ...::::
 Frog   483 IYELIKE 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
asic2XP_004918663.1 ASC 49..497 CDD:383197 109/527 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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