DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nach and asic1

DIOPT Version :9

Sequence 1:NP_001334724.1 Gene:Nach / 36864 FlyBaseID:FBgn0024319 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:541 Identity:118/541 - (21%)
Similarity:200/541 - (36%) Gaps:152/541 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FCATSSIHGLKYTRDEDTNKIVHLVWLL-----ISVVMFICAVVMARTFYMDYRSSPTRMNVESD 89
            |.:.|::|||.:....:......|:|:|     :|:::::|...:  .:|.:|   |....::..
 Frog    20 FASGSTLHGLAHIFTYERFSCRRLIWVLCFLGSLSLLLYVCTERI--IYYFEY---PHVTKLDEI 79

  Fly    90 NTPVNRLYFPPVTICPDVLFNMQKSEAFLNTLRLPK--------GAELRGILRKLHIFYGFMLDD 146
            :||  |:.||.||.|.            ||..|..:        ..||..:|...:......|.|
 Frog    80 STP--RMIFPAVTFCN------------LNEFRFSRVTKNDLYHAGELLSLLNNRYELPDSQLAD 130

  Fly   147 ERYSAEDIEQMEALL----FLNNLTIP----EFVEHLRWNCDEILYRCRFNGEIMDCS-----KI 198
            |:.       ||.|.    |.|....|    ||.:....:..|:|..|::.||  :||     .:
 Frog   131 EKV-------MEILQDKANFRNFKPKPFNMREFYDRTGHDIREMLLSCKYRGE--ECSVDDFVPV 186

  Fly   199 FQLSKTFFGHCCSFNLRQKG---WVNNKLNNLESFKVFHLNSLNFTAQRAIGGLRYGLSVVVRYK 260
            |    |.:|.|.:||..:.|   .|..|                       ||...||.:::..:
 Frog   187 F----TRYGKCYTFNSGRNGRSPLVTTK-----------------------GGTGNGLELMLDIQ 224

  Fly   261 DDNYDPL------QSYSYGVKLLIQEADAFPSAHSAAKFIAFNSETFAAVRPQE-TF-------C 311
            .|.|.|:      .|:..|:|:.|...|..|........:|...:||.:.:.|. |:       |
 Frog   225 QDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRLTYLPPPWGDC 289

  Fly   312 SSAVKALIIEERNCVFQNEFPMRYFSDYVYPNCELNCRVTNMVKFCGCHTYFFDFNRTSDRICT- 375
            .|:           ...:||    |..|....|.::|....:|:.|.|.......:..   .|| 
 Frog   290 KSS-----------AMDSEF----FDTYSISACRIDCETRYLVENCNCRMVHMPGDAA---YCTP 336

  Fly   376 --FRDI--PCLVDNFGRLLLICSKYSDFNRLLSANIITRKKSTQCYCPLTCEHIDY--DVQLTNF 434
              :::.  |.|               ||        :..|.:..|.|...|....|  ::.:...
 Frog   337 ELYKECADPAL---------------DF--------LVEKDNDFCVCETPCNMTRYGKELSMVKI 378

  Fly   435 PLELNMPVADKFYSG----LAKNDGVLHVFINSFSYRRLRRDLLSNMVTLVSNLGSAFSLFVGMS 495
            |.:.:.....|.|:.    :|:|..||.:|..:.:|..:.:.....:..|:.::|....||:|.|
 Frog   379 PSKASARYLAKKYNKSEQYIAENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGAS 443

  Fly   496 MLSVVEIIYYFSVILRKNYKL 516
            :|:|:|:..|...:||  |||
 Frog   444 ILTVLELFDYAYEVLR--YKL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NachNP_001334724.1 None
asic1XP_004912018.1 ASC 18..507 CDD:413546 118/541 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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