DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and Slc3a2

DIOPT Version :10

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_062156.2 Gene:Slc3a2 / 50567 RGDID:3073 Length:566 Species:Rattus norvegicus


Alignment Length:339 Identity:59/339 - (17%)
Similarity:108/339 - (31%) Gaps:139/339 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAGSLSLAQHNP--------HWWGNRNTIVHLFEWKWSDIAQECESFLGP--RGFAGV------- 59
            |||::.:....|        .|| ::..:..:         .:.::|:||  ||.||:       
  Rat   129 LAGAVVIIVRAPRCRELPVQRWW-HKGALYRI---------GDLQAFVGPEARGIAGLKNHLEYL 183

  Fly    60 ----------------QVSPVNENILSAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGV 108
                            |...|||..|.              ::....|::|:|.|:::......:
  Rat   184 STLKVKGLVLGPIHKNQKDEVNETDLK--------------QIDPDLGSQEDFKDLLQSAKKKSI 234

  Fly   109 RIYVDVLLNHMSGDFDGVAVGTAGTEAEPSKKSFPGVPYTAQDFHPTCEITDWNDRFQVQQCELV 173
            .|.:|:..|                             |..|           |..|...|.::|
  Rat   235 HIILDLTPN-----------------------------YKGQ-----------NAWFLPPQADIV 259

  Fly   174 GLKDLDQSSDWVRSKLIEFLDHLIELGVAGFRVDAAKHMASEDLEYI---YSSLSNLNIDHGFPH 235
            ..|..:..|.|::.            ||.||:|.....:|:..| |:   .:...|.:.|.....
  Rat   260 ATKMKEALSSWLQD------------GVDGFQVRDVGKLANASL-YLAEWQNITKNFSEDRLLIA 311

  Fly   236 NSRPFIFQEVIDHGHETVSRDEYKDLGAVTEFRFSEEIGNAFRGNNA----LKWLQSWGTDW--- 293
            .:.....|::::....|      .|| .:|....|:.:   |.|.:|    :|:|.:.|:.|   
  Rat   312 GTASSDLQQIVNILEST------SDL-LLTSSYLSQPV---FTGEHAELLVIKYLNATGSRWCSW 366

  Fly   294 ---------GFLPS 298
                     .|:|:
  Rat   367 SVSQAGLLTSFIPA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 53/314 (17%)
Aamy_C 404..492 CDD:214749
Slc3a2NP_062156.2 SLC3A2_N 81..157 CDD:464983 6/28 (21%)
AmyAc_family 139..469 CDD:476817 56/329 (17%)
Blue background indicates that the domain is not in the aligned region.

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