DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and amy2al2

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001003729.1 Gene:amy2al2 / 445049 ZFINID:ZDB-GENE-040801-179 Length:512 Species:Danio rerio


Alignment Length:512 Identity:241/512 - (47%)
Similarity:320/512 - (62%) Gaps:25/512 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNENI-- 68
            :.|.|.....|..|||||:....|.:|||||||:|:|||:|||.:|.|.|:.|||:||.:|::  
Zfish     2 MLLVLVAIFGLGFAQHNPNTKNGRTSIVHLFEWRWADIAEECERYLAPNGYGGVQISPPSEHVKL 66

  Fly    69 LSAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAV-GTAG 132
            .:...|||:|||||||.|.:|||.|.|..||:.|||:|||.||.||::|||.....|... .:.|
Zfish    67 TNPWHPWWQRYQPISYNLCSRSGTEAELKDMITRCNNVGVNIYADVVINHMCKSIHGAGTPSSCG 131

  Fly   133 TEAEPSKKSFPGVPYTAQDFHP-TC-----EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIE 191
            :..:.:|:.||.|||:..||:. .|     :|..:||.:||:.|.|..|.||....|:||.|:.|
Zfish   132 SHFDANKEDFPTVPYSYLDFNDGKCKSASGQIESYNDIYQVRDCRLEDLLDLALEKDYVRGKVAE 196

  Fly   192 FLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVSRD 256
            :|:.|||||||||||||.|||...||..:||.|..|| ...||..::|||:|||||.|.|.:...
Zfish   197 YLNKLIELGVAGFRVDACKHMWPGDLSNVYSRLKTLN-TKWFPSGTKPFIYQEVIDLGGEPIKAS 260

  Fly   257 EYKDLGAVTEFRFSEEIGNAFR--GNNALKWLQSWGTDWGFLPSGQALTFVDNHDNQRDAGA--- 316
            ||..|..||||:.|.:||.|.|  ....|.:|::||..|||:||.:||.|||||||||..||   
Zfish   261 EYYGLARVTEFKHSAKIGTAVRKWDGEKLSYLKNWGEGWGFMPSDKALVFVDNHDNQRGHGAGGA 325

  Fly   317 -VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAF--------DDHDTPPPQDAQERIISP-EFDA 371
             ||.:...|.||||..|.||:|||::|||||:.:        |::|...|....:....| ..:.
Zfish   326 SVLTFWDSRLYKMAAGFMLAHPYGVTRVMSSYQWDRKIVNGKDENDWMGPPSFSDGSTKPVPINP 390

  Fly   372 DGACVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDLSQD 436
            |..|.:||:||||||||..||.|:|.|....:..|||||::||:|.||:|||:.|||:.::|:..
Zfish   391 DSTCGDGWVCEHRWRQIRNMVIFRNVVNGQPLFNWWDNGNSQIAFSRGSKGFIVINNDNWELNAT 455

  Fly   437 LNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            |||.|.:|||||:|||.....|||||.|:|:.:|.....|...:.|..:|:|.|:|:
Zfish   456 LNTGLQSGTYCDIISGEKSGNSCTGKQVSVDSDGKATFSISHTEEDPFMAIHADSKL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 189/392 (48%)
Aamy_C 404..492 CDD:214749 42/87 (48%)
amy2al2NP_001003729.1 AmyAc_bac_euk_AmyA 25..417 CDD:200456 189/392 (48%)
Aamy_C 424..511 CDD:214749 42/86 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576493
Domainoid 1 1.000 269 1.000 Domainoid score I1797
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 577 1.000 Inparanoid score I1002
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm6522
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - O PTHR43447
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.770

Return to query results.
Submit another query.