DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and amy2a

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_998176.2 Gene:amy2a / 406539 ZFINID:ZDB-GENE-040426-2393 Length:512 Species:Danio rerio


Alignment Length:514 Identity:245/514 - (47%)
Similarity:324/514 - (63%) Gaps:30/514 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNENIL- 69
            |.:...|.| |||||.:|:....|..|||||||:|:|||.|||.:|||.||.|||:||.:|:|: 
Zfish     3 LLILAALVG-LSLAQFDPNTKSGRTAIVHLFEWRWADIAAECERYLGPNGFGGVQISPPSESIVV 66

  Fly    70 -SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAV-GTAG 132
             :...|||:|||||.|.|.:|||||.|..||:.|||:|||.||||.::|||.|...|... .:.|
Zfish    67 TNPWHPWWQRYQPIGYNLCSRSGNENELKDMITRCNNVGVNIYVDAVINHMCGSGGGSGTHSSCG 131

  Fly   133 TEAEPSKKSFPGVPYTAQDFHP-TC-----EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIE 191
            :....:.|.||.|||:..||:. .|     .|.::.|..||:.|.||||.||....|:||||:.:
Zfish   132 SYFNANNKDFPTVPYSNLDFNDGKCNTGSGNIENYQDINQVRNCRLVGLLDLALEKDYVRSKVAD 196

  Fly   192 FLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVSRD 256
            :::.||::|||||||||.|||...||..:|..|.||| ...||..::|||||||||.|.|.::..
Zfish   197 YMNKLIDMGVAGFRVDACKHMWPGDLSAVYGRLHNLN-TRWFPSGAKPFIFQEVIDLGGEPITSS 260

  Fly   257 EYKDLGAVTEFRFSEEIGNAFRGNNA--LKWLQSWGTDWGFLPSGQALTFVDNHDNQRDAGA--- 316
            ||..:|.||||::..::||..|..|.  |.:|::||..|||:||.:||.|||||||||..||   
Zfish   261 EYTGIGRVTEFKYGAKLGNIIRKWNGEKLSYLKNWGEGWGFMPSDKALVFVDNHDNQRGHGAGGA 325

  Fly   317 -VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFDDHDTPPPQDAQERIISPEFDADGA------ 374
             ::.:...|.||||..|.||:|||.:|||||:.: |.:....|| |...|.|..:.||:      
Zfish   326 SIVTFWDARLYKMAVGFMLAHPYGFTRVMSSYRW-DRNIVNGQD-QNDWIGPPSNGDGSTKPVPI 388

  Fly   375 -----CVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDLS 434
                 |.:.|:||||||||..||.|:|.|.....:.|||||.|||:|.||::||:.|||:.::|:
Zfish   389 NPDSTCGDNWVCEHRWRQIKNMVIFRNVVNGQPFSNWWDNGSNQIAFSRGSRGFIIINNDDWELN 453

  Fly   435 QDLNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            ..|:|.||.|||||||||...:|.||||.|.|..:|.....|.:.:.|..:|:|.|:|:
Zfish   454 VSLSTGLPGGTYCDVISGQKENGRCTGKEVNVGGDGKASFRISNQEEDPFIAIHADSKL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 191/394 (48%)
Aamy_C 404..492 CDD:214749 43/87 (49%)
amy2aNP_998176.2 AmyAc_bac_euk_AmyA 25..417 CDD:200456 191/394 (48%)
Aamy_C 424..511 CDD:214749 43/86 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576476
Domainoid 1 1.000 269 1.000 Domainoid score I1797
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 577 1.000 Inparanoid score I1002
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm6522
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - O PTHR43447
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.770

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