DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and amy2al1

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_956722.1 Gene:amy2al1 / 393400 ZFINID:ZDB-GENE-040426-1606 Length:512 Species:Danio rerio


Alignment Length:517 Identity:244/517 - (47%)
Similarity:323/517 - (62%) Gaps:36/517 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNENIL- 69
            |.:...|.| |.|:|||.::..||.:|||||||:|:|||:|||.:|.|.|:.|||:||.:|:|: 
Zfish     3 LLVVAALVG-LCLSQHNTNFKHNRTSIVHLFEWRWADIAKECERYLAPNGYGGVQISPPSESIVL 66

  Fly    70 -SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAV-GTAG 132
             ....|||:|||||||.|.:|||.|||..||:.|||:|||.||.|.::|||.|...|... .:.|
Zfish    67 TKPWHPWWQRYQPISYNLCSRSGTEEELKDMIARCNNVGVNIYADAVINHMCGASGGEGTHSSCG 131

  Fly   133 TEAEPSKKSFPGVPYTAQDFHPT-C-----EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIE 191
            |......:.||.|||::.||:.. |     :|.:::|.|||:.|.||.|.||....|:||.|:.|
Zfish   132 TYFNAKNEDFPSVPYSSWDFNDNKCKTANEDIENYSDIFQVRDCRLVSLLDLALEKDYVRGKVAE 196

  Fly   192 FLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVSRD 256
            :::.||::|||||||||.|||...||..:||.|..|| :..|...::|||:|||||.|.|.:...
Zfish   197 YMNKLIDIGVAGFRVDACKHMWPGDLSNVYSRLKTLN-NTWFSPGTKPFIYQEVIDLGGEPIKAS 260

  Fly   257 EYKDLGAVTEFRFSEEIGNAFRGNNALKW-------LQSWGTDWGFLPSGQALTFVDNHDNQRDA 314
            ||..||.||||::|.::|...|     ||       |::||..|||:||.:||.|||||||||..
Zfish   261 EYVSLGRVTEFKYSAKLGTVIR-----KWEKEKLCYLKNWGEGWGFMPSDKALVFVDNHDNQRGH 320

  Fly   315 GA----VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFDDHDT---------PPPQDAQERIIS 366
            ||    ||.:...|.||:||...||:|||::.||||:.:|.|..         .||.:|.....|
Zfish   321 GAGGASVLTFWDSRLYKIATGLMLAHPYGVTAVMSSYRWDRHFVNGKDQNDWMGPPSNADGSTKS 385

  Fly   367 PEFDADGACVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLY 431
            ...:.|..|.:.||||||||||..||.|:|.|....::.||||.:|||:|.||:|||:.||||.:
Zfish   386 VPINPDSTCGDNWICEHRWRQIRNMVNFRNVVNGQPLSNWWDNNNNQIAFSRGSKGFIVINNNDW 450

  Fly   432 DLSQDLNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            ||:..|.|.||:|||||:|||.....|||||.|||:.:|.....|...:.|..:|:|.|:|:
Zfish   451 DLNVMLKTGLPSGTYCDIISGDKSGNSCTGKQVTVDSDGQATFSICHTEEDPFMAIHADSKL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 188/397 (47%)
Aamy_C 404..492 CDD:214749 45/87 (52%)
amy2al1NP_956722.1 AmyAc_bac_euk_AmyA 25..417 CDD:200456 188/397 (47%)
AmyA 46..>315 CDD:223443 128/274 (47%)
Aamy_C 424..511 CDD:214749 45/86 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576494
Domainoid 1 1.000 269 1.000 Domainoid score I1797
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 577 1.000 Inparanoid score I1002
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm6522
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - O PTHR43447
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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