DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and Mal-A3

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_476628.2 Gene:Mal-A3 / 35826 FlyBaseID:FBgn0002571 Length:574 Species:Drosophila melanogaster


Alignment Length:604 Identity:118/604 - (19%)
Similarity:190/604 - (31%) Gaps:243/604 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFALTLTLCLAGSL-SLAQHNPHWWGNRNTI-VHLFEWKWSD---------IAQECESFLGPR 54
            |||. |.|:..||.:| |||:..  ||...... ::...:|.||         |.|:. .:|...
  Fly     1 MFKL-LVLSCLLALALPSLAEVG--WWKTGQFYQIYPRSFKDSDGDGVGDLIGITQQL-PYLKEI 61

  Fly    55 GFAGVQVSPVNENILSAGRPWWERYQPISYKLTTRSGNEEEFGDM------VRRCNDVGVRIYVD 113
            |.....:||:..:.::          ...|.:....|.:..||.|      :.|..::.::|.:|
  Fly    62 GITATWLSPIFTSPMA----------DFGYDVADLKGIDPIFGTMEDFEALLARAKELDIKIILD 116

  Fly   114 VLLNHMSGDFDGVAVGTAGTEAEPSKKSFPGVPYTAQDFH--------------PTCEIT----- 159
            .:.||.|.:.|......||.|             ..:||:              ||..::     
  Fly   117 FVPNHTSDECDWFIRSAAGEE-------------EYKDFYVWHTGKVVNGIRQPPTNWVSVFRGS 168

  Fly   160 --DWNDRFQVQQCELVGLK--DLDQSSDWVRSKLIEFLDHLIELGVAGFRVDAAKHM-------- 212
              .||::.|.........|  ||:..:..|...:.:.|...:..|..|||:||..|:        
  Fly   169 MWTWNEQRQAYYLHQFHAKQPDLNYRNPKVVEAMKDVLRFWLRKGAYGFRIDAVPHVYEIPADAD 233

  Fly   213 -----------ASEDLEYIYSSLSNLNIDHGFPHNSRP------FIFQEVIDH------GHETVS 254
                       .|:..:|.|       :.|.:. ..:|      :.|::||:.      |.:.|.
  Fly   234 GNWPDEPRNEAVSDPEDYTY-------LQHIYT-TDQPETLELVYAFRDVIEEIDAELGGDDRVL 290

  Fly   255 RDE-YKDLGAVTE----------------------------FRFSEEIGNAFRGNNALKWLQSWG 290
            ..| |..|..:.:                            :.:||.|.|         ||.:  
  Fly   291 LTEAYSPLEVLMQYYGNGTHLGSQIPFNFELLAKISYSSDAYHYSELIHN---------WLDN-- 344

  Fly   291 TDWGFLPSGQALTFV-DNHDNQR----------DA---------GAVLNYKSPRQYKMATAFHLA 335
                 :|.||...:| .|||..|          ||         |..:.|:....          
  Fly   345 -----MPEGQVANWVFGNHDQSRIGSRLGADRIDACNMIILGLPGVSVTYQGEEM---------- 394

  Fly   336 YPYGISRVMSSFAFDDHDTPPPQDAQ------ERII----------SPEFDA--DGACVNGWICE 382
               |::.|..|:    .||..||..|      ||:.          |.|.:|  ..|.|.     
  Fly   395 ---GMTDVWISW----EDTVDPQACQSNEQEFERLTRDPVRTPFQWSDEVNAGFSNASVT----- 447

  Fly   383 HRWRQI---YAMVGFK----------------NAVRDTEITGWWD-----NGDNQISFCRGNKGF 423
              |..:   |.:|..|                .|:||.......|     .|.|.::|.|...|:
  Fly   448 --WLPVASNYKLVNVKKERGIALSHLNVYKQLRALRDEPTLKQGDVSVTAIGPNVLAFKRSLAGY 510

  Fly   424 ------LAINNNLYDLSQD 436
                  :.||:::..::.|
  Fly   511 KSYITLININDDVESINLD 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 93/524 (18%)
Aamy_C 404..492 CDD:214749 9/44 (20%)
Mal-A3NP_476628.2 AmyAc_maltase 22..490 CDD:200467 98/541 (18%)
Alpha-amylase 46..400 CDD:278554 72/414 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443614
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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