DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and Mal-A1

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_476627.3 Gene:Mal-A1 / 35824 FlyBaseID:FBgn0002570 Length:577 Species:Drosophila melanogaster


Alignment Length:619 Identity:120/619 - (19%)
Similarity:215/619 - (34%) Gaps:207/619 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALTLTLCLAGSLSLAQHNPHWWGNRNTI-VHLFEWKWSD---------IAQECESFLGPRGFAGV 59
            |..|.|.:.|.:...:    ||.:.|.. ::...::.||         :.::.: :|...||.|.
  Fly     6 AACLLLAIVGFVGATE----WWESGNYYQIYPRSFRDSDGDGIGDLNGVTEKLQ-YLKDIGFTGT 65

  Fly    60 QVSPVNENILSAGRPWWERYQPIS--YKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGD 122
            .:||:.::      |..:....||  |::....|..|:|..|:.:..:||::|.:|.:.||.|.:
  Fly    66 WLSPIFKS------PMVDFGYDISDFYQIHPEYGTMEDFERMIAKAKEVGIKIILDFVPNHSSTE 124

  Fly   123 FDGVAVGTAGTEAEPSKKSF----------------PGVPYTAQDFHPTCEITDWND-------- 163
            .:..   |...:::|..|.|                |...:.::..:...|   ||:        
  Fly   125 NEWF---TKSVDSDPVYKDFYIWHDGKINNETGEREPPSNWNSEFRYSAWE---WNEVRQQYYLH 183

  Fly   164 RFQVQQCELVGLKDLDQSSDWVRSKLIEFLDHLIELGVAGFRVDAAKHMASEDL----EYIYSSL 224
            :|.:||.      ||:..:..|.:::...:...:..||:|||:||..::...||    :|....|
  Fly   184 QFAIQQA------DLNYRNPAVVNEMKNVIRFWLGKGVSGFRIDAVPYLFEVDLDRYNQYPDEPL 242

  Fly   225 SNLNI------DHGFPHN----------SRPFIFQEVIDHGHETVSRDE---------------- 257
            :|.::      ||.:..:          ...:.::|::|..|.....|:                
  Fly   243 TNDSVNCPDPDDHCYTQHIYTQDMPETIDMVYQWRELVDEFHVENGGDKRLLMTEAYTSFENIMT 307

  Fly   258 YKDLGAVT------EFRFSEEIGNAFRGNNALKWLQSWGTDWGFLPSGQALTFV-DNHDNQRDA- 314
            |...|...      .|.|...|.||.:....::.::.|   ...:|.|....:| .||||:|.| 
  Fly   308 YYGNGVRNGSHIPFNFDFLTSINNASKAGEYVEHIKKW---MDAMPEGVYANWVLGNHDNKRVAS 369

  Fly   315 ------------------GAVLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFDDHDTPPPQ--- 358
                              |..:.|....             .|::.|..|:    .||..|.   
  Fly   370 RFGVQRTDLINILLQTLPGHAVTYNGEE-------------LGMTDVWISW----EDTVDPNACN 417

  Fly   359 --------DAQERIISPEFDADGACVNGWI-CEHRW-------------RQIYA----MVGFKNA 397
                    .:::...|| :..|.:...|:. .:|.|             :|:.|    :..||..
  Fly   418 SDPDNYYARSRDPARSP-YQWDASSKAGFTSADHTWLPVADDYKTNNALQQLRAPRSHLQIFKKL 481

  Fly   398 VRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDLSQ---------------------DLNTCL 441
            ||..:          :.||.:|.....||::::...|:                     ||....
  Fly   482 VRVRK----------EPSFRQGELNIQAIDDDVIIYSRQKTGSDLYVIVLNLGSTSKTLDLTKYY 536

  Fly   442 PAGTYCDVISGSL----IDGSCTGKSVTVNENGY 471
            ..||..:||:.||    |||... ||.....|.|
  Fly   537 ELGTQAEVITTSLSSQYIDGDVI-KSTEFVANPY 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 91/495 (18%)
Aamy_C 404..492 CDD:214749 21/93 (23%)
Mal-A1NP_476627.3 AmyAc_maltase 21..496 CDD:200467 98/528 (19%)
Alpha-amylase 45..404 CDD:278554 73/393 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.