DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and AGBE

DIOPT Version :10

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_788342.1 Gene:AGBE / 326264 FlyBaseID:FBgn0053138 Length:685 Species:Drosophila melanogaster


Alignment Length:542 Identity:110/542 - (20%)
Similarity:163/542 - (30%) Gaps:203/542 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RGFAGVQVSPVNENILSAGRPWWERYQPIS-YKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLN 117
            :|:..:||..:.|:...|.    ..||..| |..::|.||.|:...|:...:..|:.:.:||:.:
  Fly   215 QGYNCIQVMAIMEHAYYAS----FGYQVTSFYAASSRYGNPEQLKRMIDVAHSHGLFVLLDVVHS 275

  Fly   118 HMS-------GDFDGVAV-----GTAGTEAEPSKKSFPGVPYTAQDFHPTCEITDWNDRFQVQQC 170
            |.|       ..|||...     |..|..:....:.|..|.|....| ....:..|:|.:.....
  Fly   276 HASKNVQDGLNQFDGTNSCFFHDGARGEHSLWDSRLFNYVEYEVLRF-LLSNLRWWHDEYNFDGY 339

  Fly   171 ELVGLKDLDQSSDWVRSKLIEFLDHLIELGVA---------GFRVDA--------AKHMASEDLE 218
            ...|:..:              |.|...:|..         |..||.        |.|:    |.
  Fly   340 RFDGVTSM--------------LYHSRGIGEGFSGDYNEYFGLNVDTDALNYLGLANHL----LH 386

  Fly   219 YIYSSLSNLNID-HGFPHNSRPF----------IFQEVIDHGHETV---SRDEYKDLG----AVT 265
            .|.|.:..:..| .|.|...||.          :...:.|...|.:   |.||: |:|    .:|
  Fly   387 TIDSRIITIAEDVSGMPTLCRPVSEGGIGFDYRLGMAIPDKWIELLKEQSDDEW-DMGNLVHTLT 450

  Fly   266 EFR-------FSEEIGNAFRGNNALK-WL--------------QSWGTDWGF-----------LP 297
            ..|       ::|....|..|:..:. ||              .|...|.|.           ..
  Fly   451 NRRWMENTVAYAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDSSVIIDRGLALHKMIRLITHAL 515

  Fly   298 SGQA-LTFVDN---HDNQRDAGAVLN----YKSPRQYKMATAFHLAYPY--GISRVMSSFAFDDH 352
            .|:| |.|:.|   |....|...|.|    :.:.||:.:.....|.|.|  ...|.|:       
  Fly   516 GGEAYLNFMGNEFGHPEWLDFPRVGNNDSYHYARRQWNLVDDDLLKYKYLNEFDRAMN------- 573

  Fly   353 DTPPPQDAQERIISPEFDADGACVNGWICEH---RWRQIYAMVGFKNAVRDTEITGWWDNGDNQI 414
                  :|:||.             ||:  |   .|                  ..|...||..|
  Fly   574 ------EAEERY-------------GWL--HSGPAW------------------VSWKHEGDKII 599

  Fly   415 SFCRGNKGFL------------AINNNLYDLSQDLNTCLPAGTYCDVISG--------SLIDGSC 459
            :|.|....|:            .:..|.            ||||..|:|.        :.||.:|
  Fly   600 AFERAGLVFVFNFHPQQSFTGYRVGTNW------------AGTYQAVLSSDDPLFGGHNRIDANC 652

  Fly   460 TGKSVTVNENGYGYIHIGSDDF 481
            ...|   |..||.    |..:|
  Fly   653 KHPS---NPEGYA----GRSNF 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 87/437 (20%)
Aamy_C 404..492 CDD:214749 23/98 (23%)
AGBENP_788342.1 PLN02447 9..685 CDD:215246 110/542 (20%)

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