DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and aah3

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_587976.1 Gene:aah3 / 2539415 PomBaseID:SPCC63.02c Length:564 Species:Schizosaccharomyces pombe


Alignment Length:490 Identity:105/490 - (21%)
Similarity:182/490 - (37%) Gaps:125/490 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 WSDIAQECESFLGPRGFAGVQVSPVNENI---LSAGRPWWERYQPISYK-LTTRSGNEEEFGDMV 100
            |..|..:.: ::...||..:.:||:::||   :......:..|....|: |....|.|::...::
pombe    63 WKGIENKLD-YIEDMGFNAIWISPIDKNIEGDIDGAGYAYHGYWNTDYESLNEHFGTEDDLVSLI 126

  Fly   101 RRCNDVGVRIYVDVLLNHMSGDFDGVAVGTAGTEAEPSKKSFPGVPYTAQD-FHPTCEITDW--- 161
            ...:..|:.:.:|.::|.|       |:.....:|:.|..:    |:..:. |||.| :.||   
pombe   127 TAAHKAGIWVMLDSIVNSM-------ALAPPLADADYSSLN----PFNKESYFHPYC-LIDWDIT 179

  Fly   162 NDRFQVQQC---ELVGLKDLDQSSDWVRSKLIEFLDHLI-ELGVAGFRVDAAKHMASEDLEYIYS 222
            ::...|..|   ..|.|.|||..|..|.|.|.:....|| :....|.|:||.|.|          
pombe   180 DNETNVMDCWQDSGVLLADLDVESSDVSSYLSDHFKSLISKYDFDGLRIDAVKMM---------- 234

  Fly   223 SLSNLNIDHGFPHNSRPFIFQEVIDHGHETVSRDEYKD-LGAVTEFRFSEEIGNAFRGNNALKWL 286
               |......|...:..:...||..:..:|:.  .|.. |..||.:.....|..:|....|    
pombe   235 ---NYTFFPDFVDATGVYSVGEVFSYDPDTMC--SYMSVLPGVTNYFLQLYINFSFTATGA---- 290

  Fly   287 QSWGTDWGF--LPSGQ--------------ALTFVDNHDNQRDAGAVLNYKSPRQYKM-ATAFHL 334
                   ||  :|:.|              .|||::|||..|    ...|.|.:...| |.:|.|
pombe   291 -------GFTLIPTYQEVMASNCSKYDSTLMLTFIENHDLYR----FPYYTSDQSQIMGALSFVL 344

  Fly   335 AYPYGISRVM--SSFAFDDHDTPPPQDAQERIISPEFDADGACVNGWICEH-----RWRQIYAMV 392
            .:. ||..:.  ....|:..:.|..:.|.                 |:.::     .:..|..||
pombe   345 IWD-GIPSIFYGQEQGFNGGEDPANRPAL-----------------WLTDYDQSNPYYTVIKTMV 391

  Fly   393 GFKNAV--RDTE-ITGWWDNGDNQISFCRGNK-------GFLAINNNL--YDLSQDLNTCLPAGT 445
            .|:..|  :|.: :|..:.:.::.:....|.|       ..:.:.|||  |::..:.       |
pombe   392 AFRKFVITQ
DPDWVTSTYQSIESAVDHYVGQKNDVLVMFNNMGVTNNLTIYEVETNY-------T 449

  Fly   446 YCDVISG-----SLIDGSCTGKSVTVN-ENGYGYI 474
            ..:|:|.     :|..|:  .|::|.: .|||..|
pombe   450 ANEVVSDVFGHRTLTVGA--DKTLTASMTNGYPLI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 85/394 (22%)
Aamy_C 404..492 CDD:214749 18/86 (21%)
aah3NP_587976.1 AmyAc_euk_AmyA 23..400 CDD:200458 86/397 (22%)
Alpha-amylase 61..366 CDD:278554 78/346 (23%)
DUF1966 <426..491 CDD:286359 15/66 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
TreeFam 00.000 Not matched by this tool.
32.810

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