DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and SPCC757.12

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_587687.1 Gene:SPCC757.12 / 2538825 PomBaseID:SPCC757.12 Length:625 Species:Schizosaccharomyces pombe


Alignment Length:549 Identity:119/549 - (21%)
Similarity:201/549 - (36%) Gaps:141/549 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFALTLTLCLAG-SLSLAQHNPHWWGNRNTIVH-----------------LFE------WKWSDI 43
            |.||.....|.| ..|||:.:..|   |:.|::                 .|:      ..||.|
pombe     5 KIALFSLFALFGLPTSLAKSSEEW---RDRIIYQVITDRFAVDSDNTPDCSFDDSSYCGGTWSGI 66

  Fly    44 AQECESFLGPRGFAGVQVSPVNENIL----SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCN 104
            ..:.:...| .||..:.:|||.:|:.    |.|..:...:.....:|....|:|::..|::...:
pombe    67 RSKLDYIQG-MGFNAIWISPVEKNLEGSYGSDGEAYHGYWNTDFTQLNEHFGSEDDLIDLITDMH 130

  Fly   105 DVGVRIYVDVLLNHMS--GDFDGVAVGTAGTEAEPSKKSFPGVPYT-AQDFHPTCEITDW--NDR 164
            :..:.|..|.|.|.|:  |..|.::....             ||:. :..|||.|.| |:  |:.
pombe   131 NRDMWIMFDALANSMAIPGPTDNISYSNL-------------VPFNDSSYFHPYCWI-DYGSNNN 181

  Fly   165 FQVQQC----ELVGLKDLDQSSDWVRSKLIEFLDHLIE-LGVAGFRVDAAKHMASEDLEYIYSSL 224
            ..::.|    :.|.|.|||..|..|...|.|.:..::| ..:.|.|:||.|.|..|.... |:|.
pombe   182 TDIEDCWTGDDNVILADLDIESTNVADYLHEHIHDMVERYQIDGIRIDAVKQMNPEFFPN-YTSA 245

  Fly   225 SNLNIDHGFPHNSRPFIFQEVIDHGHETVSRDEYKDLGAVTEFRFSEEIGNAFRGNN-ALKWLQS 288
            :.:            |...|:..: ...||......|.::|.:...:.|..||.... |.::||.
pombe   246 AGV------------FAIGEMFSY-DPNVSCSVRNYLDSITSYPIRQGIEFAFNYTGAAFEYLQE 297

  Fly   289 WGTDWGFLPSGQALT----FVDNH----------DNQRDAGAVLNYKSPRQYKMATAFHLAYP-- 337
            ..|.:.....||.::    |::||          |..:|.||:          :....|...|  
pombe   298 IDTQFQQACEGQDMSVIGNFLENHDLPRYTSITNDTSQDIGAI----------VFLLLHTGIPII 352

  Fly   338 -YGISRVMSSFAFDDHDTPPPQDAQERIISPEFDADGACVNGWICEHRWRQIYAMVGF-KNAVRD 400
             ||..:.:..    ..|||..:.|   :.:..:|.|.         :.::.|...:.. |.|:.|
pombe   353 YYGEEQRLPG----GSDTPENRAA---LWNYGYDTDA---------NYYQTIRTAIALRKQAISD 401

  Fly   401 TEITGWWDNG----DNQISFCRGNKG-FLAINNNLYDLSQDLNTCLPAGTYCDVISGSLIDGSCT 460
            ::  .|..:.    |..:......|| .|.:..| |:.|.|..|...:..:.|   |:::....:
pombe   402 SD--SWTTDSHSYLDYDLRHAVVRKGDVLGVYTN-YESSSDNVTYDVSSNFDD---GTVLREVLS 460

  Fly   461 GKSVTVNENGYGYIHIGSDDFDGVLALHV 489
            ..:.||..:|               ||||
pombe   461 NTTTTVGSSG---------------ALHV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 89/424 (21%)
Aamy_C 404..492 CDD:214749 19/91 (21%)
SPCC757.12NP_587687.1 AmyAc_euk_AmyA 23..401 CDD:200458 91/435 (21%)
Alpha-amylase 61..365 CDD:278554 78/346 (23%)
DUF1966 422..490 CDD:286359 17/72 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
TreeFam 00.000 Not matched by this tool.
32.810

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