DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and C50B6.7

DIOPT Version :10

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_506303.1 Gene:C50B6.7 / 179813 WormBaseID:WBGene00008220 Length:713 Species:Caenorhabditis elegans


Alignment Length:519 Identity:214/519 - (41%)
Similarity:303/519 - (58%) Gaps:42/519 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTLTLCLAGSLSLAQHNPHWWG------NRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPV 64
            |.|.|.:..|::   :|.:|:.      ||.|:||||||||:|:|:|||:||...|:..|||||.
 Worm     5 LFLFLFIKSSIA---YNFYWYDKTQTLQNRQTMVHLFEWKWADVAKECENFLQYYGYGAVQVSPP 66

  Fly    65 NENIL---SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHM--SGDFD 124
            .|::.   :...|||.||||:||||.:|||||:||.|||.|||.|||||.||:::|||  .|...
 Worm    67 MEHLKAFPNNNYPWWVRYQPVSYKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNHMVGIGQKS 131

  Fly   125 GVAVGTAGT---EAEPSKKSFPGVPYTAQDF-HPTC----EITDW-NDRFQVQQCELVGLKDLDQ 180
            |..||::|:   :.....:|||||||:..|| :|.|    :.:|: |....|:.|.||||.||:|
 Worm   132 GNGVGSSGSSSFDGTHGVQSFPGVPYSLGDFNNPKCDGDIQGSDYQNSAEHVKDCRLVGLLDLNQ 196

  Fly   181 SSDWVRSKLIEFLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEV 245
            :|..||:|::.:|:.|:::||||||.||:|||..:|:..|.:.:.:|..|. :..|.|||...||
 Worm   197 ASATVRAKIVAYLNKLVDMGVAGFRHDASKHMWPQDILNILNDVKDLRSDI-YGSNQRPFAVHEV 260

  Fly   246 IDHGHETVSRDEYKDLGAVTEFRFSEEIGNAFRGNNALKWLQSWGTDWGF--LPSGQALTFVDNH 308
            ||.|.|.|...:|...|..|.|.|...:..|.:..:..|:|.:.|..:|:  ......|.|:|||
 Worm   261 IDRGGEAVKCGDYFGNGRYTNFNFGAAVSAAAKQQSDWKYLANLGPGYGYGNNEDHDVLNFIDNH 325

  Fly   309 DNQRDAGA-VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFDDHDTPPPQDAQER---IISPEF 369
            |||||:.. |:.||..::|.:|..|.||:|||..||||||||...|..||......   ..||.|
 Worm   326 DNQRDSSPYVVTYKDGQKYNLAVGFMLAWPYGYPRVMSSFAFSYSDQSPPNSGASNDYATTSPTF 390

  Fly   370 DADGAC--VNGWICEHRWRQIYAMVGFKNAVRDT---EITGWWDNGDNQISFCRGNKGFLAINNN 429
            :.|..|  .:||:|||||..|..|..|::||:.|   :|.    ....:|:|.|..|||.|:|..
 Worm   391 NGDQTCNSNSGWVCEHRWPAIRQMAKFRSAVQGTAAADIV----TDTRRIAFARDGKGFFALNQQ 451

  Fly   430 LYDLSQDLNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            ....::...|.||||.|||..||.|.:|.|.|..:||.::...|:.:.|   :.::|:.:|:|:
 Worm   452 DGAWTKIFATNLPAGDYCDHFSGGLDNGKCVGTKITVRDDHTSYLSVPS---NSIVAISLDSKL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 174/390 (45%)
Aamy_C 404..492 CDD:214749 28/87 (32%)
C50B6.7NP_506303.1 AmyAc_bac_euk_AmyA 31..421 CDD:200456 174/390 (45%)
Aamy_C 432..511 CDD:214749 28/81 (35%)

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