DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and LOC103689940

DIOPT Version :10

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001389002.1 Gene:LOC103689940 / 103689940 RGDID:9468847 Length:508 Species:Rattus norvegicus


Alignment Length:517 Identity:252/517 - (48%)
Similarity:330/517 - (63%) Gaps:36/517 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFALTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNEN 67
            ||.|.|:|.   ....||::||....|..|||||||:|:|||:|||.:|.|:||.||||||.|||
  Rat     2 KFVLLLSLI---GFCWAQYDPHTADGRTAIVHLFEWRWADIAKECERYLAPKGFGGVQVSPPNEN 63

  Fly    68 IL--SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAVG- 129
            |:  :..|||||||||||||:.:|||||.||.|||.|||:||||||||.::|||.|  .|.:.| 
  Rat    64 IIINNPSRPWWERYQPISYKICSRSGNENEFKDMVTRCNNVGVRIYVDAVINHMCG--SGNSAGT 126

  Fly   130 --TAGTEAEPSKKSFPGVPYTAQDFHPT-C--EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKL 189
              |.|:...|:.:.|..|||:|.||:.. |  ||.::||..||:.|.|.||.||....|:||:|:
  Rat   127 HSTCGSYFNPNNREFSAVPYSAWDFNDNKCNGEINNYNDANQVRNCRLSGLLDLALDKDYVRTKV 191

  Fly   190 IEFLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVS 254
            .:::::||::||||||:||||||...|::.:...|.||| ...|...|||||||||||.|.|.:.
  Rat   192 ADYMNNLIDIGVAGFRLDAAKHMWPGDIKAVLDKLHNLN-TKWFSQGSRPFIFQEVIDLGGEAIK 255

  Fly   255 RDEYKDLGAVTEFRFSEEIGNAFRGNNA--LKWLQSWGTDWGFLPSGQALTFVDNHDNQRDAGA- 316
            ..||...|.||||::..::|...|..|.  :.:|::||..|||:|:.:||.|||||||||..|| 
  Rat   256 GSEYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFVPTDRALVFVDNHDNQRGHGAG 320

  Fly   317 ---VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAF----------DDHDTPPPQD--AQERIIS 366
               :|.:...|.||||..|.||:|||.:|||||:.:          :|...||..:  .:|..|:
  Rat   321 GASILTFWDARMYKMAVGFMLAHPYGFTRVMSSYRWARNFQNGKDVNDWIGPPNNNGVTKEVTIN 385

  Fly   367 PEFDADGACVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLY 431
            |    |..|.|.|:||||||||..||.|:|.|.......|||||.||::|.|||:||:..||:.:
  Rat   386 P----DTTCGNDWVCEHRWRQIRNMVAFRNVVNGQPFANWWDNGSNQVAFSRGNRGFIVFNNDDW 446

  Fly   432 DLSQDLNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            .||..|.|.||||||||||||..::|:|||..|.|..:|..:..|.:...|..:|:|.|:|:
  Rat   447 ALSSTLQTGLPAGTYCDVISGDKVNGNCTGLKVNVGSDGKAHFSISNSAEDPFIAIHADSKL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 198/394 (50%)
Aamy_C 404..492 CDD:214749 43/87 (49%)
LOC103689940NP_001389002.1 AmyAc_bac_euk_AmyA 25..413 CDD:200456 198/394 (50%)
Aamy_C 419..507 CDD:214749 43/87 (49%)

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