DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amyrel and amy2a

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_002938902.1 Gene:amy2a / 100125163 XenbaseID:XB-GENE-968629 Length:511 Species:Xenopus tropicalis


Alignment Length:510 Identity:251/510 - (49%)
Similarity:326/510 - (63%) Gaps:26/510 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNENILSAG 72
            |.|.:|..|..||:||:....|.:|||||||:|.|||.|||.:|||.||.|||:||.||:|:...
 Frog     4 LLLLVAIGLCSAQYNPNTQSGRTSIVHLFEWRWDDIAAECERYLGPNGFGGVQISPPNEHIIVTN 68

  Fly    73 --RPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAV-GTAGTE 134
              ||||||||||||||.:|||||::|.|||.|||:|||.||||.::|||.|...|... .:.|:.
 Frog    69 PYRPWWERYQPISYKLCSRSGNEQQFRDMVTRCNNVGVYIYVDAVINHMCGSGGGAGTHSSCGSY 133

  Fly   135 AEPSKKSFPGVPYTAQDFHP-TC-----EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 193
            .....:.|| |||::.||:. .|     ||.:::|..||:.|.||||.||....|:||.|:.||:
 Frog   134 FNAGSREFP-VPYSSWDFNDGKCRTGSGEIENYSDANQVRDCRLVGLLDLALEKDYVRGKIAEFM 197

  Fly   194 DHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVSRDEY 258
            ::||.:||||||:||||||...||:.|...|:||| ...||..:||||||||||.|.|.:|.:||
 Frog   198 NNLINIGVAGFRLDAAKHMWPGDLKAISERLNNLN-TKWFPAGARPFIFQEVIDLGGEAISVNEY 261

  Fly   259 KDLGAVTEFRFSEEIGNAFRGNNA--LKWLQSWGTDWGFLPSGQALTFVDNHDNQRDAGA----V 317
            ..:|.||||::..::|...|..|.  |.:|::||..|||:|:.:||.|||||||||..||    :
 Frog   262 YGIGRVTEFKYGAKLGTVIRKWNGEKLSYLRNWGEGWGFMPNDRALVFVDNHDNQRGHGAGGASI 326

  Fly   318 LNYKSPRQYKMATAFHLAYPYGISRVMSSFAF--------DDHD-TPPPQDAQERIISPEFDADG 373
            |.:...|.|||...|.||:|||.:||||||.:        |.:| ..||.::.....|...:.|.
 Frog   327 LTFWDARLYKMGVGFMLAHPYGFTRVMSSFRWSRNIVNGKDQNDWIGPPSNSDGSTKSVPINPDS 391

  Fly   374 ACVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDLSQDLN 438
            .|.:.|:||||||||..||.|:|.......:.|||||.||::|.||||||:..||:.:.|...||
 Frog   392 TCGDNWVCEHRWRQIKNMVTFRNVADGQPFSNWWDNGSNQVAFGRGNKGFIIFNNDDWQLDVTLN 456

  Fly   439 TCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            |.||:|||||||||......|||:.:.|:.|||....|.::|.|...|:||:||:
 Frog   457 TGLPSGTYCDVISGQKEGSRCTGRQINVDGNGYAKFQISNNDEDPFAAIHVNAKL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 197/392 (50%)
Aamy_C 404..492 CDD:214749 44/87 (51%)
amy2aXP_002938902.1 AmyAc_bac_euk_AmyA 25..416 CDD:200456 197/392 (50%)
Aamy_C 423..510 CDD:214749 44/86 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 264 1.000 Domainoid score I1877
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 567 1.000 Inparanoid score I1058
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm9418
Panther 1 1.100 - - O PTHR43447
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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