DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and Amy2a3

DIOPT Version :10

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001153623.1 Gene:Amy2a3 / 100043686 MGIID:3714985 Length:508 Species:Mus musculus


Alignment Length:515 Identity:253/515 - (49%)
Similarity:332/515 - (64%) Gaps:32/515 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFALTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNEN 67
            ||.|.|:|.   ....||::||....|..|||||||:|.|||:|||.:|.|:||.||||||.|||
Mouse     2 KFVLLLSLI---GFCWAQYDPHTSDGRTAIVHLFEWRWVDIAKECERYLAPKGFGGVQVSPPNEN 63

  Fly    68 IL--SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAVGT 130
            ::  :..|||||||||||||:.||||||:||.|||.|||:||||||||.::|||.|  .|...||
Mouse    64 VVVHNPSRPWWERYQPISYKICTRSGNEDEFRDMVTRCNNVGVRIYVDAVINHMCG--AGNPAGT 126

  Fly   131 A---GTEAEPSKKSFPGVPYTAQDFHPT-C--EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKL 189
            :   |:...|:.:.||.|||:|.||:.. |  ||.::||.:||:.|.|.||.||....|:||:|:
Mouse   127 SSTCGSYLNPNNREFPAVPYSAWDFNDNKCNGEIDNYNDAYQVRNCRLTGLLDLALEKDYVRTKV 191

  Fly   190 IEFLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVS 254
            .::::|||::||||||:||||||...|::.:...|.||| ...|...|||||||||||.|.|.:.
Mouse   192 ADYMNHLIDIGVAGFRLDAAKHMWPGDIKAVLDKLHNLN-TKWFSQGSRPFIFQEVIDLGGEAIK 255

  Fly   255 RDEYKDLGAVTEFRFSEEIGNAFRGNNA--LKWLQSWGTDWGFLPSGQALTFVDNHDNQRDAGA- 316
            ..||...|.||||::..::|...|..|.  :.:|::||..||.:||.:||.|||||||||..|| 
Mouse   256 GSEYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGLVPSDRALVFVDNHDNQRGHGAG 320

  Fly   317 ---VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAF--------DDHD--TPPPQDAQERIISPE 368
               :|.:...|.||||..|.||:|||.:|||||:.:        |.:|  .||..:...:.::  
Mouse   321 GSSILTFWDARMYKMAVGFMLAHPYGFTRVMSSYRWNRNFQNGKDQNDWIGPPNNNGVTKEVT-- 383

  Fly   369 FDADGACVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDL 433
            .:||..|.|.|:||||||||..||.|:|.|.....:.||||..||::|.|||:||:..||:.:.|
Mouse   384 INADTTCGNDWVCEHRWRQIRNMVAFRNVVNGQPFSNWWDNNSNQVAFSRGNRGFIVFNNDDWAL 448

  Fly   434 SQDLNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            |..|.|.||||||||||||..:||:|||..|.|..:|..:..|.:...|..:|:|.|:|:
Mouse   449 SATLQTGLPAGTYCDVISGDKVDGNCTGLRVNVGSDGKAHFSISNSAEDPFIAIHADSKL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 199/392 (51%)
Aamy_C 404..492 CDD:214749 43/87 (49%)
Amy2a3NP_001153623.1 AmyAc_bac_euk_AmyA 25..413 CDD:200456 199/392 (51%)
Aamy_C 420..507 CDD:214749 43/86 (50%)

Return to query results.
Submit another query.