DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and Amy2a1

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_036019386.1 Gene:Amy2a1 / 100043207 MGIID:104548 Length:508 Species:Mus musculus


Alignment Length:515 Identity:253/515 - (49%)
Similarity:332/515 - (64%) Gaps:32/515 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFALTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESFLGPRGFAGVQVSPVNEN 67
            ||.|.|:|.   ....||::||....|..|||||||:|.|||:|||.:|.|:||.||||||.|||
Mouse     2 KFVLLLSLI---GFCWAQYDPHTSDGRTAIVHLFEWRWVDIAKECERYLAPKGFGGVQVSPPNEN 63

  Fly    68 IL--SAGRPWWERYQPISYKLTTRSGNEEEFGDMVRRCNDVGVRIYVDVLLNHMSGDFDGVAVGT 130
            ::  :..|||||||||||||:.||||||:||.|||.|||:||||||||.::|||.|  .|...||
Mouse    64 VVVHNPSRPWWERYQPISYKICTRSGNEDEFRDMVTRCNNVGVRIYVDAVINHMCG--AGNPAGT 126

  Fly   131 A---GTEAEPSKKSFPGVPYTAQDFHPT-C--EITDWNDRFQVQQCELVGLKDLDQSSDWVRSKL 189
            :   |:...|:.:.||.|||:|.||:.. |  ||.::||.:||:.|.|.||.||....|:||:|:
Mouse   127 SSTCGSYLNPNNREFPAVPYSAWDFNDNKCNGEIDNYNDAYQVRNCRLTGLLDLALEKDYVRTKV 191

  Fly   190 IEFLDHLIELGVAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGHETVS 254
            .::::|||::||||||:||||||...|::.:...|.||| ...|...|||||||||||.|.|.:.
Mouse   192 ADYMNHLIDIGVAGFRLDAAKHMWPGDIKAVLDKLHNLN-TKWFSQGSRPFIFQEVIDLGGEAIK 255

  Fly   255 RDEYKDLGAVTEFRFSEEIGNAFRGNNA--LKWLQSWGTDWGFLPSGQALTFVDNHDNQRDAGA- 316
            ..||...|.||||::..::|...|..|.  :.:|::||..||.:||.:||.|||||||||..|| 
Mouse   256 GSEYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGMVPSDRALVFVDNHDNQRGHGAG 320

  Fly   317 ---VLNYKSPRQYKMATAFHLAYPYGISRVMSSFAF--------DDHD--TPPPQDAQERIISPE 368
               :|.:...|.||||..|.||:|||.:|||||:.:        |.:|  .||..:...:.::  
Mouse   321 GSSILTFWDARMYKMAVGFMLAHPYGFTRVMSSYRWNRNFQNGKDQNDWIGPPNNNGVTKEVT-- 383

  Fly   369 FDADGACVNGWICEHRWRQIYAMVGFKNAVRDTEITGWWDNGDNQISFCRGNKGFLAINNNLYDL 433
            .:||..|.|.|:||||||||..||.|:|.|.....:.||||..||::|.|||:||:..||:.:.|
Mouse   384 INADTTCGNDWVCEHRWRQIRNMVAFRNVVNGQPFSNWWDNNSNQVAFSRGNRGFIVFNNDDWAL 448

  Fly   434 SQDLNTCLPAGTYCDVISGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV 493
            |..|.|.||||||||||||..:||:|||..|.|..:|..:..|.:...|..:|:|.|:|:
Mouse   449 SATLQTGLPAGTYCDVISGDKVDGNCTGLRVNVGSDGKAHFSISNSAEDPFIAIHADSKL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 199/392 (51%)
Aamy_C 404..492 CDD:214749 43/87 (49%)
Amy2a1XP_036019386.1 AmyAc_bac_euk_AmyA 25..413 CDD:200456 199/392 (51%)
Aamy_C 420..507 CDD:214749 43/86 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 273 1.000 Domainoid score I1776
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.