DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amyrel and si:dkey-202g17.3

DIOPT Version :9

Sequence 1:NP_477262.1 Gene:Amyrel / 36863 FlyBaseID:FBgn0020506 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_001343266.1 Gene:si:dkey-202g17.3 / 100003805 ZFINID:ZDB-GENE-131127-371 Length:487 Species:Danio rerio


Alignment Length:426 Identity:79/426 - (18%)
Similarity:122/426 - (28%) Gaps:171/426 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFALTLTLC--------LAGSLSLAQHNP-------HWWGNRNTIVHLFEWKWSDIAQECESFLG 52
            ||...|.||        |..::.:...:|       ||| .|:.|..|....:.|..::.:|   
Zfish    65 KFRRRLVLCFWICWMLLLGAAVLIVIRSPRATSPVLHWW-QRDLIYRLQPMLFLDADRQQDS--- 125

  Fly    53 PRGFAGVQVSPVNENI-----LSAGRPWWERYQPISYKLTTRSGNEEEFG------DMVRRCNDV 106
                   :::.|.|.:     :.||....|.....|...|..:..::..|      .::......
Zfish   126 -------RINRVCERLPYLKSVGAGAVILEGLFGNSSSSTNLTEIDQNLGTLPQLTQLITESRKA 183

  Fly   107 GVRIYVDVL------------------------------LNHMSGDFDGVAVGTAGTEAEPSKKS 141
            |||:.:|:.                              |:|....|     |...|:|..|.|:
Zfish   184 GVRVILDLCELDLFEQESNNDTAVWSGASESIQYSLRYWLDHGVSGF-----GICDTDAAFSAKT 243

  Fly   142 FPGVPYTAQDFHPTCEITDWN---DRFQVQQCELV--------GLKDLDQSSDWVRSKLIEFLDH 195
                            :.:||   ..|..|..|.:        .|..|:.||         |...
Zfish   244 ----------------LMEWNKLMQEFSSQDDERILMVRQTGNTLPVLNVSS---------FAGS 283

  Fly   196 LIELGVAGFRVDAAKHMAS--EDLEYIYSSLS-------NLNIDHGFPHNSRPFIF--------Q 243
            |:|| |....:..:.|..|  |..|.|..||.       :..:..|.|......|.        .
Zfish   284 LVEL-VTKSLIPPSHHPLSTAEVAEAIEVSLQMPQRDWPSWTVGGGVPRELNRAILLLIMTLPGT 347

  Fly   244 EVIDHGHETVS----------------------RDEYKDLGAVTEFRFSEEIGNAFRGNNA---- 282
            .:|.:|.|..|                      |:|....|..|...|:..:.::...|..    
Zfish   348 PIIKYGDELSSAQGWNRLNQPLALFQSLSQSRAREEALHFGRFTFLSFNTSLPSSSGLNTTDTPL 412

  Fly   283 LKWLQSWG------------------TDWG-FLPSG 299
            |.:|:|||                  .||. .||.|
Zfish   413 LAYLRSWGCVHFLVLFNLGSAPHTMDPDWAPSLPEG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmyrelNP_477262.1 AmyAc_bac_euk_AmyA 29..398 CDD:200456 69/385 (18%)
Aamy_C 404..492 CDD:214749
si:dkey-202g17.3XP_001343266.1 SLC3A2_N 49..105 CDD:292647 10/40 (25%)
AmyAc_family 93..404 CDD:298606 62/352 (18%)
Alpha-amylase 132..362 CDD:278554 47/260 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576488
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.