DRSC/TRiP Functional Genomics Resources

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Protein Alignment gprs and Klhl40

DIOPT Version :10

Sequence 1:NP_725599.2 Gene:gprs / 36862 FlyBaseID:FBgn0024232 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001101665.2 Gene:Klhl40 / 316088 RGDID:1305368 Length:621 Species:Rattus norvegicus


Alignment Length:390 Identity:82/390 - (21%)
Similarity:146/390 - (37%) Gaps:100/390 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 IPEPSGQQHQTLIIEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLEELRRACAGFVQ 185
            :.||.|...  |.:||..|||..|::.|::|..:.|...::..:..||..:.:..:...|..|:|
  Rat    63 LAEPDGAGE--LRLEEVSPDVVSQVLHYLYTSEIALDEASVQDLFAAAHRFQIPSIFTICVSFLQ 125

  Fly   186 ---CCINVDTV--------CALLASAERYIQYKCTK-TLVQKVLEFVDEHGTEVLNLGSFTLLPQ 238
               |..|...|        ||.||.|.|  .:.|.: .||.:..:|:.....|::          
  Rat   126 KRLCLANCLAVFRLGLLLDCARLAVAAR--DFICARFPLVARDNDFLGLSADELI---------- 178

  Fly   239 HVVRLILAREELRAD-EFTKFQAALMWSKKYYDNNPNIDIKEILGTFCEYIQFHKIPANVLMREI 302
                .|::.:.|..: |...|:|.:.|:.. .|.:...:.:..|.|..|.|:...:|...|...:
  Rat   179 ----AIISSDGLNVEKEEAVFEAVMRWASS-GDADVQAEHQRALPTVFESIRCRLLPRAFLESRV 238

  Fly   303 --HPLNLVPYAIIMNALAYQADPESIDPGKLSPNSSRQHHRHRHHHQSLPKIRKAK----SQSFR 361
              |||             .::.||.:...::..::         |...|..:||.|    .|:.|
  Rat   239 ERHPL-------------VRSQPELLRKVQMVKDA---------HEGRLTTLRKKKKEKGEQTAR 281

  Fly   362 TRRSPSERRSPNNAPNLTLNTSLTSGNGEKKRSPLTPKSPVMP--VPESKSPGSSSQKTPTSLSR 424
            |:.:             ...|..|....:::|        |:|  :.::...|...|.....:|.
  Rat   282 TKEA-------------NQGTEDTKAEDDEER--------VLPGILNDTLRFGMFLQDLIFMISE 325

  Fly   425 QGTLR---ASNRRKNSGQLSISLGTQGRRSPVGLNDRSPQGRRSPLFPSSGL----RSPNDPMTS 482
            :|.:.   |:|.     ....||.||..::.|.|..:..|     :|.:.||    .:..|||::
  Rat   326 EGAVAYDPAANE-----CYCASLSTQIPKNHVSLVTKENQ-----VFVAGGLFYNEDNKEDPMSA 380

  Fly   483  482
              Rat   381  380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gprsNP_725599.2 BTB_POZ_BTBD19 26..184 CDD:349603 16/62 (26%)
BACK_GPRS_like 189..268 CDD:350582 19/88 (22%)
Klhl40NP_001101665.2 BTB_POZ 6..137 CDD:453885 20/75 (27%)
PHA03098 47..594 CDD:222983 82/390 (21%)
KELCH repeat 351..398 CDD:276965 9/35 (26%)
KELCH repeat 402..448 CDD:276965
KELCH repeat 452..497 CDD:276965
KELCH repeat 500..545 CDD:276965
KELCH repeat 547..594 CDD:276965
Blue background indicates that the domain is not in the aligned region.

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