DRSC/TRiP Functional Genomics Resources

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Protein Alignment gprs and Spop

DIOPT Version :10

Sequence 1:NP_725599.2 Gene:gprs / 36862 FlyBaseID:FBgn0024232 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001093966.1 Gene:Spop / 287643 RGDID:1311613 Length:374 Species:Rattus norvegicus


Alignment Length:247 Identity:49/247 - (19%)
Similarity:97/247 - (39%) Gaps:69/247 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PDLSTFENKTGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLASRSRVFAKMLYAAPSPQR 79
            |:....:...||.|:.:|....  ||    :.|...:   |.||:||:||.||:.|.      :.
  Rat   182 PECRLADELGGLWENSRFTDCC--LC----VAGQEFQ---AHKAILAARSPVFSAMF------EH 231

  Fly    80 KRETSTKENKLRLFLKRSSEPLLNLQNAAQQRTGYTQQLAPIPEPSGQQHQTLIIEEFEPDVFRQ 144
            :.|.| |:|::.                                          |.:.||:||::
  Rat   232 EMEES-KKNRVE------------------------------------------INDVEPEVFKE 253

  Fly   145 LIEYIHTGCVTLQPRTLLGVMNAADYYGLEELRRACAGFVQCCINVDTVCALLASAERYIQYKCT 209
            ::.:|:||......:....::.|||.|.||.|:..|...:...::|:....:|..|:.:    ..
  Rat   254 MMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLH----SA 314

  Fly   210 KTLVQKVLEFVDEHGTEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAA 261
            ..|..:.::|::.|.::||....:.       .::::...|.|:.:....:|
  Rat   315 DQLKTQAVDFINYHASDVLETSGWK-------SMVVSHPHLVAEAYRSLASA 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gprsNP_725599.2 BTB_POZ_BTBD19 26..184 CDD:349603 36/157 (23%)
BACK_GPRS_like 189..268 CDD:350582 11/73 (15%)
SpopNP_001093966.1 MATH_SPOP 28..166 CDD:239743
BTB_POZ_SPOP-like 182..301 CDD:349588 39/176 (22%)
BACK_SPOP 297..367 CDD:350593 11/74 (15%)
Blue background indicates that the domain is not in the aligned region.

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