DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5065 and FAR4

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_190040.3 Gene:FAR4 / 823579 AraportID:AT3G44540 Length:493 Species:Arabidopsis thaliana


Alignment Length:504 Identity:130/504 - (25%)
Similarity:235/504 - (46%) Gaps:78/504 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 QFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARL-TELLNAPLFESLR 184
            ||...:::.:||..||:.||.|||:||..|:::.::||:|....:....|. :|:|...||..|:
plant     7 QFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKDLFRVLK 71

  Fly   185 QEKPKE------LSKVIPISGDITSEELGISEKD--QNLLCRNVSVVFHSAATVKFDEKLKLSVT 241
            .....|      ..||:||.|||:.:.||:...|  |: :...:.::.:.|||..|||:..:.::
plant    72 NALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQH-MWNEIDIIVNVAATTNFDERYDVGLS 135

  Fly   242 INMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIIS----LI------ 296
            :|..|...::....:.:....|:||||||.   |.:.|.:::...::..:.::    |:      
plant   136 VNTFGPLNVLNFAKKCVKGQLLLHVSTAYV---RGEKSGLLHEKTFHMGETLNGHRKLVIETEME 197

  Fly   297 ------------NWLPEDI------LDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVR 343
                        |...|:|      |.....:|.| .||||.|||::.|.:|.....|||:.|:|
plant   198 LMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHG-WPNTYVFTKSMGEMLLGNYRENLPIVIIR 261

  Fly   344 PSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWRTA 408
            |:::|::.:|||.||::.......::.|..||..:..:.:.|.|.|::|||:|.|.|:.|| ...
plant   262 PTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMVTAA-AIH 325

  Fly   409 TRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVRKHPL-----------EGCL--------WYPT 454
            ..|..:..:|:..:..:|||.:.:....|.:...|:||           :|.:        :|.|
plant   326 AGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQFSFYMT 390

  Fly   455 GDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIA-KAVECLEYFATRQWRFKD 518
              ||...|:..|..|       |::  .....|.|...::.:.|:| :.|:....:...:..|.|
plant   391 --LRYKLPLQMLRLI-------YVI--YPWWNGNKYKDIDRKIKLAMRLVDLYRPYVLFKGIFDD 444

  Fly   519 DNVHALLHTLSPKDRE---IFVFDVRHINWDKYVER-YVLGFREFLFKQ 563
            .|...|.......::|   :|.||.:.|:|:.|:.. ::.|...::.|:
plant   445 TNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPGLITYVLKK 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 99/355 (28%)
Sterile 472..562 CDD:281068 18/94 (19%)
FAR4NP_190040.3 PLN02996 1..492 CDD:215538 129/501 (26%)
FAR-N_SDR_e 12..362 CDD:187547 99/355 (28%)
Sterile 393..492 CDD:281068 21/107 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.870

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