DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5065 and Far2

DIOPT Version :9

Sequence 1:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_006237759.1 Gene:Far2 / 500368 RGDID:1565966 Length:515 Species:Rattus norvegicus


Alignment Length:494 Identity:207/494 - (41%)
Similarity:309/494 - (62%) Gaps:8/494 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESL 183
            ||.||:.:|:.|||.|||:||||:|||.|:.|.::.||:|:|||.||.:..|:.::||:.|||.:
  Rat     4 IAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFERV 68

  Fly   184 RQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTK 248
            ::..|....|:.|||.|:...:..||::|...|....::|||.||||:||..|:.:|.:|:..|:
  Rat    69 KEVCPNVHEKIRPISADLNQRDFAISKEDMQELLSCTNIVFHCAATVRFDAHLREAVQLNVTATQ 133

  Fly   249 RLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIG 313
            :|:.:...|..|:|.||:|||:.||:.:.:.||||..|..|..||..:.||.:.|::::||:|||
  Rat   134 QLLLMASEMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKLIG 198

  Fly   314 KRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFR 378
            .||||||:||||.|.::.:|:|||.|||||||||.|:..|||.|||||.|||:||:.|..||..|
  Rat   199 DRPNTYTYTKALGEVVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKGFLR 263

  Fly   379 TMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVRK 443
            ::......|||::|||.|:||.||..|.||..:..:.|||:..:|..||..|.|.....:.:|.|
  Rat   264 SIKATPMAVADLIPVDTVVNLTIAVGWYTAVHRPKSTLIYHSTSGNLNPCNWYEMGLQVLATVEK 328

  Fly   444 HPLEGCLWYPTGDLRMN----RPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNKIAKAVE 504
            .|.|.....|..|...|    :..||::    |:.||.|.|...|:.|:||.::.:.|::.|.:.
  Rat   329 IPFESAFRRPNADFTTNNFTTQYWNTVS----HWAPAIIYDFYLRLTGRKPRMLKLMNRLLKTIS 389

  Fly   505 CLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVLGFREFLFKQRPESLP 569
            .||||....|.:..:|...||..|||:|:.:|.||||.:||.:|:|.||||.:::|.|:....:|
  Rat   390 MLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDLAGIP 454

  Fly   570 ASRKRMLRLYYLHQLTKLVAVLLTWRFLMSRSKRLNDLW 608
            .:::.:.||..:|.|......|:.||.|::||:...::|
  Rat   455 KAKQHLKRLRNIHYLFNTALFLIIWRLLIARSQMARNIW 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 146/318 (46%)
Sterile 472..562 CDD:281068 37/89 (42%)
Far2XP_006237759.1 FAR-N_SDR_e 11..318 CDD:187547 143/306 (47%)
Sterile 357..447 CDD:397244 37/89 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351502
Domainoid 1 1.000 288 1.000 Domainoid score I1509
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69247
Inparanoid 1 1.050 437 1.000 Inparanoid score I1632
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - otm44391
orthoMCL 1 0.900 - - OOG6_100550
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.660

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